Evidence map›Paper›PMID 17589817›Full record

ArticleJournal of molecular medicine (Berlin, Germany)2007

Identification of cellular targets for the human papillomavirus E6 and E7 oncogenes by RNA interference and transcriptome analyses.

Ruprecht Kuner, Markus Vogt, Holger Sultmann, Andreas Buness, Susanne Dymalla, Julia Bulkescher, Mark Fellmann, Karin Butz, Annemarie Poustka, Felix Hoppe-Seyler

Abstract read
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In one paragraph

Article in Journal of molecular medicine (Berlin, Germany), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
2.7field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. A review on current status of antiviral siRNA.Reviews in medical virology · 2018
    Review
  6. ViralOncotarget · 2017
    Article
  7. Review
  8. Article
  9. Article
  10. The Interaction Between Human Papillomaviruses and the Stromal Microenvironment.Progress in molecular biology and translational science · 2016
    Review
  11. Article
  12. Review
  13. Article
  14. Article
  15. Review
  16. Cell growth inhibition in HPV 18 positive uveal melanoma cells by E6/E7 siRNA.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2013
    Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Ruprecht KunerMolecular Genome Analysis, German Cancer Research Center, Im Neuenheimer Feld 580, 69120 Heidelberg, Germany.
Markus Vogt
Holger Sultmann
Andreas Buness
Susanne Dymalla
Julia Bulkescher
Mark Fellmann
Karin Butz
Annemarie Poustka
Felix Hoppe-Seyler
German Cancer Research Center · DEHeidelberg University · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Specific types of human papillomaviruses (HPVs) cause cervical cancer, the second most common tumor in women worldwide. Both cellular transformation and the maintenance of the oncogenic phenotype of HPV-positive tumor cells are linked to the expression of the viral E6 and E7 oncogenes. To identify downstream cellular target genes for the viral oncogenes, we silenced endogenous E6 and E7 expression in HPV-positive HeLa cells by RNA interference (RNAi). Subsequently, we assessed changes of the cellular transcriptome by genome-wide microarray analysis. We identified 648 genes, which were either downregulated (360 genes) or upregulated (288 genes), upon inhibition of E6/E7 expression. A large fraction of these genes is involved in tumor-relevant processes, such as apoptosis control, cell cycle regulation, or spindle formation. Others may represent novel cellular targets for the HPV oncogenes, such as a large group of C-MYC-associated genes involved in RNA processing and splicing. Comparison with published microarray data revealed a substantial concordance between the genes repressed by RNAi-mediated E6/E7 silencing in HeLa cells and genes reported to be upregulated in HPV-positive cervical cancer biopsies.

Indexed as

Gene Expression ProfilingGene Expression Regulation, ViralRNA InterferenceCell CycleCluster AnalysisDNA-Binding ProteinsFemaleGene Regulatory NetworksHeLa CellsHuman papillomavirus 18HumansOncogene Proteins, ViralRepressor ProteinsRNA Processing, Post-TranscriptionalRNA, Small InterferingUterine Cervical NeoplasmsDNA-Binding ProteinsE6 protein, Human papillomavirus type 18E7 protein, Human papillomavirus type 18Oncogene Proteins, ViralRepressor ProteinsRNA, Small Interfering

Identifiers

PMID17589817
OpenAlexW2114893781

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.