ArticleBioinformatics (Oxford, England)2007
HaploBuild: an algorithm to construct non-contiguous associated haplotypes in family based genetic studies.
Article in Bioinformatics (Oxford, England), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
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Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
14 citing papers in PubMed.
- Superior haplotypes for transforming crop breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Review
- The integration of quantile regression with 3VmrMLM identifies more QTNs and QTN-by-environment interactions using SNP- and haplotype-based markers.Plant communications · 2025Article
- Review
- Features and applications of haplotypes in crop breeding.Communications biology · 2021Review
- Status and prospects of genome-wide association studies in plants.The plant genome · 2021Review
- Bayesian Analysis of the Association between Casein Complex Haplotype Variants and Milk Yield, Composition, and Curve Shape Parameters in Murciano-Granadina Goats.Animals : an open access journal from MDPI · 2020Article
- Selecting Closely-Linked SNPs Based on Local Epistatic Effects for Haplotype Construction Improves Power of Association Mapping.G3 (Bethesda, Md.) · 2019Article
- Rule-based induction method for haplotype comparison and identification of candidate disease loci.Genome medicine · 2012Article
- Multi-locus stepwise regression: a haplotype-based algorithm for finding genetic associations applied to atopic dermatitis.BMC medical genetics · 2012Article
- A hierarchical Bayesian network approach for linkage disequilibrium modeling and data-dimensionality reduction prior to genome-wide association studies.BMC bioinformatics · 2011Article
- Automated construction and testing of multi-locus gene-gene associations.Bioinformatics (Oxford, England) · 2011Article
- Exploring multilocus associations of inflammation genes and colorectal cancer risk using hapConstructor.BMC medical genetics · 2010Article
- Systematic haplotype analysis resolves a complex plasma plant sterol locus on the Micronesian Island of Kosrae.Proceedings of the National Academy of Sciences of the United States of America · 2009Article
- hapConstructor: automatic construction and testing of haplotypes in a Monte Carlo framework.Bioinformatics (Oxford, England) · 2008Article
Corrections and comments
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Authors and funding
4 authors.
Funding
Abstract
unlabelledWe have created a program that searches densely genotyped regions for associated non-contiguous haplotypes using a standard family based haplotype association test. This program was designed to expand upon the 'sliding window' methodologies commonly used for haplotype construction by allowing the association of subsets of single nucleotide polymorphisms (SNPs) to drive the construction of the haplotype. This strategy permits HaploBuild to construct more biologically relevant haplotypes that are not constrained by arbitrary length and contiguous orientation. AVAILABILITY: http://snp.bumc.bu.edu.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.