Evidence map›Paper›PMID 17586759›Full record

ArticleRNA (New York, N.Y.)2007

Selection of an improved RNA polymerase ribozyme with superior extension and fidelity.

Hani S Zaher, Peter J Unrau

Abstract readEvaluation Study
In one paragraph

Article in RNA (New York, N.Y.), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 89 papers.

0numbers the graph read from it
0cells of the map it votes in
89citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

89 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. RNA life on the edge of catastrophe.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. RNA-catalyzed evolution of catalytic RNA.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  7. Article
  8. Review
  9. Article
  10. Article
  11. Review
  12. Pushing the Limits of Nucleic Acid Function.Chemistry (Weinheim an der Bergstrasse, Germany) · 2022
    Review
  13. Genome Evolution from Random Ligation of RNAs of Autocatalytic Sets.International journal of molecular sciences · 2021
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. An RNA polymerase ribozyme that synthesizes its own ancestor.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  20. Article

29 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Hani S ZaherDepartment of Molecular Biology and Biochemistry, Simon Fraser University, BC, Canada.
Peter J Unrau

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Our current understanding of biology suggests that early life relied predominantly on RNA for catalysis and replication. Here, we report the isolation of an RNA polymerase ribozyme called B6.61 that exhibits superior extension and fidelity relative to its progenitor, the Round-18 polymerase. The B6.61 polymerase was selected from a mutagenized pool containing approximately 9 x 10(14) sequence variants through the use of a novel large-scale in vitro compartmentalization system. B6.61 polymerized all tested primer-template (PT) complexes faster than the Round-18 variant. For one PT, B6.61 exhibited dramatically faster elongation past one full helical turn and incorporated at least 20 nucleotides of sequence, setting a new extension record for an RNA polymerase ribozyme. The increased efficiency of the B6.61 construct was related to improvements in fidelity, with the new variant incorporating less incorrect wobble base pairs than its parent. This new polymerase demonstrates the feasibility of evolving an artificial RNA replicase ribozyme in the foreseeable future.

Indexed as

Base SequenceCatalysisDirected Molecular EvolutionDNA-Directed RNA PolymerasesEfficiencyFeasibility StudiesModels, BiologicalMolecular Sequence DataMutagenesis, Site-DirectedNucleic Acid ConformationPolymerase Chain ReactionProtein EngineeringQuality ControlRNA, CatalyticSequence Homology, Nucleic AcidTemplates, GeneticDNA-Directed RNA PolymerasesRNA, Catalytic

Identifiers

PMID17586759
PMCPMC1894930

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.