Evidence map›Paper›PMID 17581864›Full record

ArticleMolecular biology of the cell2007

HIV-1 Nef-induced down-regulation of MHC class I requires AP-1 and clathrin but not PACS-1 and is impeded by AP-2.

Nienke B Lubben, Daniela A Sahlender, Alison M Motley, Paul J Lehner, Philippe Benaroch, Margaret S Robinson

Abstract read
In one paragraph

Article in Molecular biology of the cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 62 papers.

0numbers the graph read from it
0cells of the map it votes in
62citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

62 citing papers in PubMed, 110 citations in OpenAlex.

  1. Review
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  5. Annals of the rheumatic diseases · 2024
    Article
  6. Article
  7. Inhibition of major histocompatibility complex-I antigen presentation by sarbecovirus ORF7a proteins.Proceedings of the National Academy of Sciences of the United States of America · 2022
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2 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Nienke B LubbenUniversity of Cambridge, Cambridge Institute for Medical Research, Cambridge CB2 0XY, United Kingdom.
Daniela A Sahlender
Alison M Motley
Paul J Lehner
Philippe Benaroch
Margaret S Robinson
University of Cambridge · GBInstitut Curie · FR

Funding

Medical Research Council G0600823Wellcome Trust 051269
6 · The paper itself

Abstract

Major histocompatibility complex class I is down-regulated from the surface of human immunodeficiency virus (HIV)-1-infected cells by Nef, a virally encoded protein that is thought to reroute MHC-I to the trans-Golgi network (TGN) in a phosphofurin acidic cluster sorting protein (PACS) 1, adaptor protein (AP)-1, and clathrin-dependent manner. More recently, an alternative model has been proposed, in which Nef uses AP-1 to direct MHC-I to endosomes and lysosomes. Here, we show that knocking down either AP-1 or clathrin with small interfering RNA inhibits the down-regulation of HLA-A2 (an MHC-I isotype) by Nef in HeLa cells. However, knocking down PACS-1 has no effect, not only on Nef-induced down-regulation of HLA-A2 but also on the localization of other proteins containing acidic cluster motifs. Surprisingly, knocking down AP-2 actually enhances Nef activity. Immuno-electron microscopy labeling of Nef-expressing cells indicates that HLA-A2 is rerouted not to the TGN, but to endosomes. In AP-2-depleted cells, more of the HLA-A2 localizes to the inner vesicles of multivesicular bodies. We propose that depleting AP-2 potentiates Nef activity by altering the membrane composition and dynamics of endosomes and causing increased delivery of HLA-A2 to a prelysosomal compartment.

Indexed as

Adaptor Protein Complex 1Adaptor Protein Complex 2Adaptor Proteins, Signal TransducingBlotting, WesternClathrinDown-RegulationGene Products, nefHeLa CellsHIV-1HLA-A2 AntigenHumansnef Gene Products, Human Immunodeficiency VirusProtein TransportRNA, Small InterferingVacuolesVesicular Transport ProteinsAdaptor Protein Complex 1Adaptor Protein Complex 2Adaptor Proteins, Signal TransducingClathrinGene Products, nefHLA-A2 Antigennef Gene Products, Human Immunodeficiency VirusPACS1 protein, humanPACS2 protein, humanRNA, Small InterferingVesicular Transport Proteins

Identifiers

PMID17581864
PMCPMC1951775
OpenAlexW2031744869

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.