Evidence map›Paper›PMID 17576668›Full record

ArticleNucleic acids research2007

Adaptation in bacterial flagellar and motility systems: from regulon members to 'foraging'-like behavior in E. coli.

Kai Zhao, Mingzhu Liu, Richard R Burgess

Abstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 94 papers.

0numbers the graph read from it
0cells of the map it votes in
94citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

94 citing papers in PubMed.

  1. A copper uptake ABC transport system is essential forEmerging microbes & infections · 2026
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  3. The extreme halophilic archaeonJournal of bacteriology · 2026
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  8. Origin and adaptive evolutionary trajectory of the 3' UTR-derived sRNA UhpU in Enterobacteriaceae.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  11. Linalool disruptsFrontiers in veterinary science · 2025
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  14. Genetic components ofFrontiers in microbiology · 2023
    Article
  15. Article
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  17. Coordination of gene expression with cell size enablesProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  18. Novel Antibiofilm Inhibitor Ginkgetin as an Antibacterial Synergist againstInternational journal of molecular sciences · 2022
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  19. Article
  20. Article

34 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Kai ZhaoMcArdle Laboratory for Cancer Research, Department of Genetics, University of Wisconsin, Madison, WI 53706, USA.
Mingzhu Liu
Richard R Burgess

Funding

RNA POLYMERASE SIGMA SUBUNIT: STRUCTURE AND FUNCTIONR01GM028575 · NIGMS · UNIVERSITY OF WISCONSIN MADISON · PI BURGESS, RICHARD RAY · 1985 to 2004
$1.3M
NIGMS NIH HHS GM28575NIGMS NIH HHS R01 GM028575
6 · The paper itself

Abstract

Bacterial flagellar motility and chemotaxis help cells to reach the most favorable environments and to successfully compete with other micro-organisms in response to external stimuli. Escherichia coli is a motile gram-negative bacterium, and the flagellar regulon in E. coli is controlled by a master regulator FlhDC as well as a second regulator, flagellum-specific sigma factor, sigma(F). To define the physiological role of these two regulators, we carried out transcription profiling experiments to identify, on a genome-wide basis, genes under the control of these two regulators. In addition, the synchronized pattern of increasing CRP activity causing increasing FlhDC expression with decreasing carbon source quality, together with the apparent coupling of motility activity with the activation of motility and chemotaxis genes in poor quality carbon sources, highlights the importance of CRP activation in allowing E. coli to devote progressively more of its limited reserves to search out better conditions. In adaptation to a variety of carbon sources, the motile bacteria carry out tactical responses by increasing flagellar operation but restricting costly flagellar synthesis, indicating its capability of strategically using the precious energy in nutrient-poor environments for maximizing survival.

Indexed as

RegulonAdaptation, PhysiologicalBinding SitesCarbonChemotaxisCyclic AMP Receptor ProteinDNA-Binding ProteinsEscherichia coliEscherichia coli ProteinsFlagellaGene Expression ProfilingGene Expression Regulation, BacterialMovementSigma FactorTrans-ActivatorsTranscription FactorsCarboncrp protein, E coliCyclic AMP Receptor ProteinDNA-Binding ProteinsEscherichia coli ProteinsflhC protein, E coliflhD protein, E coliSigma Factorsporulation-specific sigma factorsTrans-ActivatorsTranscription Factors

Identifiers

PMID17576668
PMCPMC1935009

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.