Evidence map›Paper›PMID 17575051›Full record

ArticleGenes & development2007

The band mutation in Neurospora crassa is a dominant allele of ras-1 implicating RAS signaling in circadian output.

William J Belden, Luis F Larrondo, Allan C Froehlich, Mi Shi, Chen-Hui Chen, Jennifer J Loros, Jay C Dunlap

Open access · diamondAbstract read
In one paragraph

Article in Genes & development, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 110 papers.

0numbers the graph read from it
0cells of the map it votes in
110citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

110 citing papers in PubMed, 174 citations in OpenAlex.

  1. Article
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  7. Circadian rhythms: pervasive, and often times evasive.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2025
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  10. Effects of COCurrent opinion in microbiology · 2024
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  12. The auxotrophicFungal genetics reports · 2024
    Article
  13. Article
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  16. Antisense Transcription of theJournal of biological rhythms · 2023
    Article
  17. Article
  18. Do Sleep Disturbances have a Dual Effect on Alzheimer's Disease?Cellular and molecular neurobiology · 2023
    Review
  19. Article
  20. Article

50 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

William J BeldenDartmouth Medical School, Genetics Department, Hanover, New Hampshire 03755, USA.
Luis F Larrondo
Allan C Froehlich
Mi Shi
Chen-Hui Chen
Jennifer J Loros
Jay C Dunlap
Dartmouth College · US

Funding

Tools for Functional Analysis and Cell BiologyP01GM068087 · NIGMS · DARTMOUTH COLLEGE · PI GALAGAN, JAMES E · 2004 to 2013
$19.3M
GENETIC AND MOLECULAR DISSECTION OF THE NEUROSPORA CLOCKR01GM034985 · NIGMS · DARTMOUTH COLLEGE · PI DUNLAP, JAY C. · 1986 to 2015
$5.7M
IDENTIFICATION AND ANALYSIS OF CLOCK-CONTROLLED GENESR01MH044651 · NIMH · DARTMOUTH COLLEGE · PI LOROS, JENNIFER J. · 1989 to 2007
$4.7M
GENETIC AND MOLECULAR DISSECTION OF THE NEUSPORA CLOCKR37GM034985 · NIGMS · DARTMOUTH COLLEGE · PI DUNLAP, JAY C · 1998 to 2007
$4.4M
Role of Chromatin Remodeling in Circadian RegulationF32GM071223 · NIGMS · DARTMOUTH COLLEGE · PI BELDEN, WILLIAM J · 2004 to 2006
$149k
NIGMS NIH HHS F32 GM071223NIGMS NIH HHS GM071223NIGMS NIH HHS GM34985NIGMS NIH HHS GM68087NIGMS NIH HHS P01 GM068087NIGMS NIH HHS R01 GM034985NIGMS NIH HHS R37 GM034985NIMH NIH HHS MH44651NIMH NIH HHS R01 MH044651
6 · The paper itself

Abstract

band, an allele enabling clear visualization of circadianly regulated spore formation (conidial banding), has remained an integral tool in the study of circadian rhythms for 40 years. bd was mapped using single-nucleotide polymorphisms (SNPs), cloned, and determined to be a T79I point mutation in ras-1. Alterations in light-regulated gene expression in the ras-1(bd) mutant suggests that the Neurospora photoreceptor WHITE COLLAR-1 is a target of RAS signaling, and increases in transcription of both wc-1 and fluffy show that regulators of conidiation are elevated in ras-1(bd). Comparison of ras-1(bd) with dominant active and dominant-negative ras-1 mutants and biochemical assays of RAS function indicate that RAS-1(bd) displays a modest enhancement of GDP/GTP exchange and no change in GTPase activity. Because the circadian clock in ras-1(bd) appears to be normal, ras-1(bd) apparently acts to amplify a subtle endogenous clock output signal under standard assay conditions. Reactive oxygen species (ROS), which can affect and be affected by RAS signaling, increase conidiation, suggesting a link between generation of ROS and RAS-1 signaling; surprisingly, however, ROS levels are not elevated in ras-1(bd). The data suggest that interconnected RAS- and ROS-responsive signaling pathways regulate the amplitude of circadian- and light-regulated gene expression in Neurospora.

Indexed as

Genes, FungalAllelesAmino Acid SequenceCircadian RhythmDNA-Binding ProteinsFungal ProteinsGenes, DominantModels, MolecularMolecular Sequence DataNeurospora crassaPoint Mutationras ProteinsReactive Oxygen SpeciesSequence Homology, Amino AcidSignal TransductionSpores, FungalDNA-Binding ProteinsFungal Proteinsras ProteinsReactive Oxygen SpeciesTranscription Factorswc-1 protein, Neurospora crassa

Identifiers

PMID17575051
PMCPMC1891427
OpenAlexW2144695921

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.