Evidence map›Paper›PMID 17573433›Full record

ArticleBiophysical journal2007

Near infrared dyes as lifetime solvatochromic probes for micropolarity measurements of biological systems.

Mikhail Y Berezin, Hyeran Lee, Walter Akers, Samuel Achilefu

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 68 papers.

0numbers the graph read from it
0cells of the map it votes in
68citing papers in PubMed
13.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

68 citing papers in PubMed, 159 citations in OpenAlex.

  1. Article
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  9. Self-Reporting Therapeutic Protein Nanoparticles.ACS applied materials & interfaces · 2024
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  18. Optica · 2022
    Article
  19. Article
  20. Article

8 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Mikhail Y BerezinDepartment of Radiology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Hyeran Lee
Walter Akers
Samuel Achilefu
Washington University in St. Louis · US

Funding

UIUC Nanomaterials & Nanofabrication for Targeting CancerU54CA119342 · NCI · WASHINGTON UNIVERSITY · PI WICKLINE, SAMUEL A · 2005 to 2009
$16.5M
SYNTHESIS COMPONENTU01HL080729 · NHLBI · WASHINGTON UNIVERSITY · PI ABENDSCHEIN, DANA R · 2005 to 2009
$12.1M
Optical Probes &Methods for Imaging Integrin ExpressionR01CA109754 · NCI · WASHINGTON UNIVERSITY · PI ACHILEFU, SAMUEL · 2004 to 2008
$2.9M
Tissue-Specific Optical Imaging Agents and MethodsR01EB001430 · NIBIB · WASHINGTON UNIVERSITY · PI ACHILEFU, SAMUEL · 2004 to 2007
$1.3M
NCI NIH HHS R01 CA109754NCI NIH HHS U54 CA119342NHLBI NIH HHS 1 U01 HL080729NHLBI NIH HHS U01 HL080729NIBIB NIH HHS R01 EB001430NIBIB NIH HHS R01 EB1430
6 · The paper itself

Abstract

The polarity of biological mediums controls a host of physiological processes such as digestion, signaling, transportation, metabolism, and excretion. With the recent widespread use of near-infrared (NIR) fluorescent dyes for biological imaging of cells and living organisms, reporting medium polarity with these dyes would provide invaluable functional information in addition to conventional optical imaging parameters. Here, we report a new approach to determine polarities of macro- and microsystems for in vitro and potential in vivo applications using NIR polymethine molecular probes. Unlike the poor solvatochromic response of NIR dyes in solvents with diverse polarity, their fluorescence lifetimes are highly sensitive, increasing by a factor of up to 8 on moving from polar to nonpolar mediums. We also established a correlation between fluorescence lifetime and solvent orientation polarizability and developed a lifetime polarity index for determining the polarity of complex systems, including micelles and albumin binding sites. Because of the importance of medium polarity in molecular, cellular, and biochemical processes and the significance of reduced autofluorescence and deep tissue penetration of light in the NIR region, the findings reported herein represent an important advance toward using NIR molecular probes to measure the polarity of complex biological systems in vitro and in vivo.

Indexed as

Coloring AgentsMolecular Probe TechniquesBiopolymersMolecular ConformationSolventsSpectrophotometry, InfraredBiopolymersColoring AgentsSolvents

Identifiers

PMID17573433
PMCPMC1989699
OpenAlexW2013019179

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.