Evidence map›Paper›PMID 17573423›Full record

ArticleBiophysical journal2007

Infrared spectroscopy study on the conformational changes leading to pore formation of the toxin sticholysin II.

Jorge Alegre-Cebollada, Alvaro Martínez del Pozo, José G Gavilanes, Erik Goormaghtigh

Open access · bronzeAbstract readComparative Study
In one paragraph

Article in Biophysical journal, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 39 citations in OpenAlex.

  1. Article
  2. Sea Anemones, Actinoporins, and Cholesterol.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Jorge Alegre-CebolladaDepartamento de Bioquímica y Biología Molecular I, Facultad de Ciencias Químicas, Universidad Complutense, 28040 Madrid, Spain. alegre@bbm1.ucm.es
Alvaro Martínez del Pozo
José G Gavilanes
Erik Goormaghtigh
Universidad Complutense de Madrid · ESVIB-VUB Center for Structural Biology · BE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The structure of the actinoporin sticholysin II (StnII) in the pore state was investigated by Fourier transform infrared spectroscopy in the attenuated total reflection configuration. 1-Palmitoyl-2-oleoyl-sn-glycero-3-phosphocholine/cholesterol unilamellar vesicles were employed. The alpha-helix content increases in approximately 30% upon lipid binding, which agrees with an extension of eight or nine residues at the N-terminal helix. Furthermore, analyses of dichroic spectra show that the extended N-terminal helix would have a 31 degrees tilt with respect to the membrane normal. The orientation of the central beta-sandwich was also estimated. In addition, it was detected that StnII alters the orientation of the lipid acyl chains. (1)H/(2)H exchange experiments sustain a mainly superficial interaction between StnII and the membrane, with no protection of the beta-sandwich. The implications of the results in the mechanism of pore formation are discussed.

Indexed as

AnimalsCholesterolCnidarian VenomsMembranes, ArtificialPhosphatidylcholinesPore Forming Cytotoxic ProteinsProtein ConformationProtein Structure, SecondarySea AnemonesSpectrophotometry, InfraredToxins, Biological1-palmitoyl-2-oleoylphosphatidylcholineCholesterolCnidarian VenomsMembranes, ArtificialPhosphatidylcholinesPore Forming Cytotoxic Proteinssticholysin IIToxins, Biological

Identifiers

PMID17573423
PMCPMC2025675
OpenAlexW2102206503

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.