Evidence map›Paper›PMID 17569639›Full record

ReviewPhilosophical transactions of the Royal Society of London. Series B, Biological sciences2007

Understanding endothelial cell apoptosis: what can the transcriptome, glycome and proteome reveal?

Muna Affara, Benjamin Dunmore, Christopher Savoie, Seiya Imoto, Yoshinori Tamada, Hiromitsu Araki, D Stephen Charnock-Jones, Satoru Miyano, Cristin Print

Open access · greenAbstract readReview
In one paragraph

Review in Philosophical transactions of the Royal Society of London. Series B, Biological sciences, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
2.3field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 43 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. SARS-CoV-2 and Plasma Hypercoagulability.Cellular and molecular bioengineering · 2021
    Review
  9. Biphasic Effect of Pirfenidone on Angiogenesis.Frontiers in pharmacology · 2021
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. CD31 signals confer immune privilege to the vascular endothelium.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Introduction. Bioengineering the heart.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2007
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Muna AffaraDepartment of Pathology, Cambridge University, Tennis Court Road, Cambridge CB2 1QP, UK.
Benjamin Dunmore
Christopher Savoie
Seiya Imoto
Yoshinori Tamada
Hiromitsu Araki
D Stephen Charnock-Jones
Satoru Miyano
Cristin Print
University of Cambridge · GBRosie Hospital · GBThe University of Tokyo · JPTokyo University of Science · JPUniversity of Auckland · NZ

Funding

Wellcome Trust
6 · The paper itself

Abstract

Endothelial cell (EC) apoptosis may play an important role in blood vessel development, homeostasis and remodelling. In support of this concept, EC apoptosis has been detected within remodelling vessels in vivo, and inactivation of EC apoptosis regulators has caused dramatic vascular phenotypes. EC apoptosis has also been associated with cardiovascular pathologies. Therefore, understanding the regulation of EC apoptosis, with the goal of intervening in this process, has become a current research focus. The protein-based signalling and cleavage cascades that regulate EC apoptosis are well known. However, the possibility that programmed transcriptome and glycome changes contribute to EC apoptosis has only recently been explored. Traditional bioinformatic techniques have allowed simultaneous study of thousands of molecular signals during the process of EC apoptosis. However, to progress further, we now need to understand the complex cause and effect relationships among these signals. In this article, we will first review current knowledge about the function and regulation of EC apoptosis including the roles of the proteome transcriptome and glycome. Then, we assess the potential for further bioinformatic analysis to advance our understanding of EC apoptosis, including the limitations of current technologies and the potential of emerging technologies such as gene regulatory networks.

Indexed as

ApoptosisCardiovascular DiseasesEndothelial CellsHumansPolysaccharidesProteomeTranscription, GeneticPolysaccharidesProteome

Identifiers

PMID17569639
PMCPMC2440409
OpenAlexW2121347941

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.