Evidence map›Paper›PMID 17567613›Full record

ArticleNucleic acids research2007

PLP/DM20 ratio is regulated by hnRNPH and F and a novel G-rich enhancer in oligodendrocytes.

Erming Wang, Neviana Dimova, Franca Cambi

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
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  9. Review
  10. The epigenetic landscape of oligodendrocyte lineage cells.Annals of the New York Academy of Sciences · 2023
    Review
  11. Review
  12. A Mutation inThe Journal of neuroscience : the official journal of the Society for Neuroscience · 2020
    Article
  13. Article
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  16. Article
  17. Review
  18. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Erming WangDepartment of Neurology, University of Kentucky, Lexington, KY, USA.
Neviana Dimova
Franca Cambi
University of Kentucky · US

Funding

PLP alternative splicing and oligodendrocyte differentiationR01NS053905 · NINDS · UNIVERSITY OF KENTUCKY · PI CAMBI, FRANCA · 2007 to 2011
$1.8M
NINDS NIH HHS R01 NS053905NINDS NIH HHS R01NS053905
6 · The paper itself

Abstract

Alternative splicing of competing 5' splice sites is regulated by enhancers and silencers in the spliced exon. We have characterized sequences and splicing factors that regulate alternative splicing of PLP and DM20, myelin proteins produced by oligodendrocytes (OLs) by selection of 5' splice sites in exon 3. We identify a G-rich enhancer (M2) of DM20 5' splice site in exon 3B and show that individual G triplets forming M2 are functionally distinct and the distal group plays a dominant role. G-rich M2 and a G-rich splicing enhancer (ISE) in intron 3 share similarities in function and protein binding. The G-rich sequences are necessary for binding of hnRNPs to both enhancers. Reduction in hnRNPH and F expression in differentiated OLs correlates temporally with increased PLP/DM20 ratio. Knock down of hnRNPH increased PLP/DM20 ratio, while hnRNPF did not. Silencing hnRNPH and F increased the PLP/DM20 ratio more than hnRNPH alone, demonstrating a novel synergistic effect. Mutation of M2, but not ISE reduced the synergistic effect. Replacement of M2 and all G runs in exon 3B abolished it almost completely. We conclude that developmental changes in hnRNPH/F associated with OLs differentiation synergistically regulate PLP alternative splicing and a G-rich enhancer participates in the regulation.

Indexed as

Alternative SplicingRegulatory Sequences, Ribonucleic AcidBase SequenceBinding SitesBlotting, WesternCells, CulturedDNA-Binding ProteinsExonsGuanineHeterogeneous-Nuclear Ribonucleoprotein Group F-HHumansMembrane ProteinsMolecular Sequence DataMyelin Proteolipid ProteinOligodendrogliaRNA InterferenceDNA-Binding ProteinsGuanineHeterogeneous-Nuclear Ribonucleoprotein Group F-HMembrane ProteinsMyelin Proteolipid ProteinPLP1 protein, humanRegulatory Sequences, Ribonucleic AcidRNA Splice Sites

Identifiers

PMID17567613
PMCPMC1919487
OpenAlexW2089608572

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.