Evidence map›Paper›PMID 17560837›Full record

ArticleDNA repair2007

Recovery of cell cycle delay following targeted gene repair by oligonucleotides.

Luciana Ferrara, Julia U Engstrom, Timothy Schwartz, Hetal Parekh-Olmedo, Eric B Kmiec

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 24 citations in OpenAlex.

  1. On the Origins of Homology Directed Repair in Mammalian Cells.International journal of molecular sciences · 2021
    Article
  2. Article
  3. Article
  4. CRISPR-DirectedThe CRISPR journal · 2018
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Luciana FerraraDepartment of Biological Sciences, University of Delaware, Delaware Biotechnology Institute, 15 Innovation Way, Newark, DE 19711, USA.
Julia U Engstrom
Timothy Schwartz
Hetal Parekh-Olmedo
Eric B Kmiec
Biotechnology Institute · USUniversity of Delaware · US

Funding

Regulation of Targeted Gene CorrectionR01CA089325 · NCI · UNIVERSITY OF DELAWARE · PI KMIEC, ERIC B. · 2001 to 2012
$2.6M
NCI NIH HHS R01 CA089325NCI NIH HHS R01 CA 89325-01A1
6 · The paper itself

Abstract

We have previously shown that activation of the homologous recombinational repair pathway leads to a block of cell division in corrected cells, possibly through the activity of checkpoint proteins Chk1 and Chk2. In this study, we examine the long-term impact of this stalling on the growth of cells that have enabled gene repair events. Using a mutated eGFP gene as an episomal reporter, we show that corrected (eGFP-positive) cells contain only a few active replication templates 2 weeks after electroporation, yet do not display an apoptotic or senescent phenotype. By 6 weeks after electroporation, cells resume active replication with a cell cycle profile that is comparable to that of the non-corrected (eGFP-negative) population. These results indicate that the initial stalling is transient and eGFP-positive cells eventually resume a normal phenotypic growth pattern, allowing for passaging and expansion in vitro.

Indexed as

DNA RepairBase SequenceCell CycleDNA ReplicationOligonucleotidesOligonucleotides

Identifiers

PMID17560837
PMCPMC2083256
OpenAlexW2105095880

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.