Evidence map›Paper›PMID 17557838›Full record

ArticleApplied and environmental microbiology2007

Identification of human-pathogenic strains of Shiga toxin-producing Escherichia coli from food by a combination of serotyping and molecular typing of Shiga toxin genes.

Lothar Beutin, Angelika Miko, Gladys Krause, Karin Pries, Sabine Haby, Katja Steege, Nadine Albrecht

Open access · greenAbstract readEvaluation Study
In one paragraph

Article in Applied and environmental microbiology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed
7.9field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 176 citations in OpenAlex.

  1. Genomic structure ofMicrobial genomics · 2026
    Article
  2. Article
  3. Article
  4. Draft genome sequence of a Shiga toxin-producingMicrobiology resource announcements · 2024
    Article
  5. Article
  6. Molecular serotyping of Shiga toxin-producingVeterinary research forum : an international quarterly journal · 2023
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Molecular characterization ofItalian journal of food safety · 2019
    Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Shiga Toxin Subtypes of Non-O157Frontiers in cellular and infection microbiology · 2017
    Article
  18. Article
  19. TheFrontiers in cellular and infection microbiology · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Lothar BeutinNational Reference Laboratory for Escherichia coli, Centre for Infectiology and Pathogen Characterization (4Z), Federal Institute for Risk Assessment (BfR), Diedersdorfer Weg 1, Berlin, Germany. l.beutin@bfr.bund.de
Angelika Miko
Gladys Krause
Karin Pries
Sabine Haby
Katja Steege
Nadine Albrecht
Federal Institute for Risk Assessment · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We examined 219 Shiga toxin-producing Escherichia coli (STEC) strains from meat, milk, and cheese samples collected in Germany between 2005 and 2006. All strains were investigated for their serotypes and for genetic variants of Shiga toxins 1 and 2 (Stx1 and Stx2). stx(1) or variant genes were detected in 88 (40.2%) strains and stx(2) and variants in 177 (80.8%) strains. Typing of stx genes was performed by stx-specific PCRs and by analysis of restriction fragment length polymorphisms (RFLP) of PCR products. Major genotypes of the Stx1 (stx(1), stx(1c), and stx(1d)) and the Stx2 (stx(2), stx(2d), stx(2-O118), stx(2e), and stx(2g)) families were detected, and multiple types of stx genes coexisted frequently in STEC strains. Only 1.8% of the STEC strains from food belonged to the classical enterohemorrhagic E. coli (EHEC) types O26:H11, O103:H2, and O157:H7, and only 5.0% of the STEC strains from food were positive for the eae gene, which is a virulence trait of classical EHEC. In contrast, 95 (43.4%) of the food-borne STEC strains carried stx(2) and/or mucus-activatable stx(2d) genes, an indicator for potential high virulence of STEC for humans. Most of these strains belonged to serotypes associated with severe illness in humans, such as O22:H8, O91:H21, O113:H21, O174:H2, and O174:H21. stx(2) and stx(2d) STEC strains were found frequently in milk and beef products. Other stx types were associated more frequently with pork (stx(2e)), lamb, and wildlife meat (stx(1c)). The combination of serotyping and stx genotyping was found useful for identification and for assignment of food-borne STEC to groups with potential lower and higher levels of virulence for humans.

Indexed as

Bacterial Typing TechniquesFood MicrobiologyShiga Toxin 1Shiga Toxin 2AnimalsCattleCheeseEscherichia coliEscherichia coli ProteinsFood ContaminationHumansMeatMilkMolecular Sequence DataPolymerase Chain ReactionPolymorphism, Restriction Fragment LengthEscherichia coli ProteinsShiga Toxin 1Shiga Toxin 2

Identifiers

PMID17557838
PMCPMC1951031
OpenAlexW2118152759

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.