Evidence map›Paper›PMID 17545593›Full record

ArticleCancer research2007

Retroviral insertional mutagenesis identifies genes that collaborate with NUP98-HOXD13 during leukemic transformation.

Christopher Slape, Helge Hartung, Ying-Wei Lin, Juraj Bies, Linda Wolff, Peter D Aplan

Open access · greenAbstract read
In one paragraph

Article in Cancer research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 68 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Christopher SlapeGenetics Branch, Laboratory of Cellular Oncology, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, Maryland 20889-5105, USA.
Helge Hartung
Ying-Wei Lin
Juraj Bies
Linda Wolff
Peter D Aplan
National Cancer Institute · US

Funding

Activation of Proto-Oncogenes--Chromosomal TranslocationZ01SC010378 · SC · DIVISION OF CLINICAL SCIENCES - NCI · PI APLAN, PETER D · 2001 to 2008
$1.5M
Oncogenes &tumor suppressors in acute myeloid leukemiaZ01BC008952 · NCI · BASIC SCIENCES · PI WOLFF, LINDA · 1996 to 2007
$1.4M
Intramural NIH HHS Z01 SC010378
6 · The paper itself

Abstract

The t(2;11)(q31;p15) chromosomal translocation results in a fusion between the NUP98 and HOXD13 genes and has been observed in patients with myelodysplastic syndrome (MDS) or acute myelogenous leukemia. We previously showed that expression of the NUP98-HOXD13 (NHD13) fusion gene in transgenic mice results in an invariably fatal MDS; approximately one third of mice die due to complications of severe pancytopenia, and about two thirds progress to a fatal acute leukemia. In the present study, we used retroviral insertional mutagenesis to identify genes that might collaborate with NHD13 as the MDS transformed to an acute leukemia. Newborn NHD13 transgenic mice and littermate controls were infected with the MOL4070LTR retrovirus. The onset of leukemia was accelerated, suggesting a synergistic effect between the NHD13 transgene and the genes neighboring retroviral insertion events. We identified numerous common insertion sites located near protein-coding genes and confirmed dysregulation of a subset of these by expression analyses. Among these genes were Meis1, a known collaborator of HOX and NUP98-HOX fusion genes, and Mn1, a transcriptional coactivator involved in human leukemia through fusion with the TEL gene. Other putative collaborators included Gata2, Erg, and Epor. Of note, we identified a common insertion site that was >100 kb from the nearest coding gene, but within 20 kb of the miR29a/miR29b1 microRNA locus. Both of these miRNA were up-regulated, demonstrating that retroviral insertional mutagenesis can target miRNA loci as well as protein-coding loci. Our data provide new insights into NHD13-mediated leukemogenesis as well as retroviral insertional mutagenesis mechanisms.

Indexed as

AnimalsCell Transformation, NeoplasticCloning, MolecularERG1 Potassium ChannelEther-A-Go-Go Potassium ChannelsGATA2 Transcription FactorHomeodomain ProteinsLeukemia, MyeloidMiceMice, TransgenicMicroRNAsMoloney murine leukemia virusMutagenesis, InsertionalMyeloid Ecotropic Viral Integration Site 1 ProteinNeoplasm ProteinsNIH 3T3 CellsERG1 Potassium ChannelEther-A-Go-Go Potassium ChannelsGata2 protein, mouseGATA2 Transcription FactorHomeodomain ProteinsHoxd13 protein, mouseKcnh2 protein, mouseMEIS1 protein, humanMeis1 protein, mouseMicroRNAsMn1 protein, mouseMyeloid Ecotropic Viral Integration Site 1 ProteinNeoplasm Proteinsnuclear pore complex protein 98Nuclear Pore Complex ProteinsOncogene ProteinsOncogene Proteins, FusionTrans-ActivatorsTranscription FactorsTumor Suppressor Proteins

Identifiers

PMID17545593
PMCPMC1950322
OpenAlexW2126462622

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.