Evidence map›Paper›PMID 17544011›Full record

ArticleMathematical biosciences2007

Statistical properties of ion channel records. Part II: estimation from the macroscopic current.

Ali Nekouzadeh, Yoram Rudy

Abstract read
In one paragraph

Article in Mathematical biosciences, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ali NekouzadehCardiac Bioelectricity and Arrhythmia Center, Washington University in St. Louis, 290 Whitaker Hall, Campus Box 1097, One Brooking Drive, St. Louis, MO 63130-4899, USA. ali@biomed.wustl.edu
Yoram Rudy

Funding

CARDIAC EXCITATION AND ARRHYTHMIASR01HL049054 · NHLBI · WASHINGTON UNIVERSITY · PI RUDY, YORAM · 1993 to 2017
$5.8M
INVERSE AND FORWARD PROBLEMS IN ELECTROCARDIOGRAPHYR37HL033343 · NHLBI · WASHINGTON UNIVERSITY · PI RUDY, YORAM · 1998 to 2007
$2.0M
NHLBI NIH HHS R01 HL049054NHLBI NIH HHS R01-HL 49054NHLBI NIH HHS R37 HL033343NHLBI NIH HHS R37-HL 33343
6 · The paper itself

Abstract

Macroscopic ion channel current is the summation of the stochastic records of individual channel currents and therefore relates to their statistical properties. As a consequence of this relationship, it may be possible to derive certain statistical properties of single channel records or even generate some estimates of the records themselves from the macroscopic current when the direct measurement of single channel currents is not applicable. We present a procedure for generating the single channel records of an ion channel from its macroscopic current when the stochastic process of channel gating has the following two properties: (I) the open duration is independent of the time of opening event and has a single exponential probability density function (pdf), (II) all the channels have the same probability to open at time t. The application of this procedure is considered for cases where direct measurement of single channel records is difficult or impossible. First, the probability density function (pdf) of opening events, a statistical property of single channel records, is derived from the normalized macroscopic current and mean channel open duration. Second, it is shown that under the conditions (I) and (II), a non-stationary Markov model can represent the stochastic process of channel gating. Third, the non-stationary Markov model is calibrated using the results of the first step. The non-stationary formulation increases the model ability to generate a variety of different single channel records compared to common stationary Markov models. The model is then used to generate single channel records and to obtain other statistical properties of the records. Experimental single channel records of inactivating BK potassium channels are used to evaluate how accurately this procedure reconstructs measured single channel sweeps.

Indexed as

Models, BiologicalIon Channel GatingIon ChannelsLarge-Conductance Calcium-Activated Potassium ChannelsMarkov ChainsMathematicsPatch-Clamp TechniquesProbabilitySoftware DesignStochastic ProcessesIon ChannelsLarge-Conductance Calcium-Activated Potassium Channels

Identifiers

PMID17544011
PMCPMC2151058

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.