Evidence map›Paper›PMID 17543337›Full record

ArticleJournal of molecular biology2007

Non-homologous recombination of deoxyribonucleoside kinases from human and Drosophila melanogaster yields human-like enzymes with novel activities.

Monica L Gerth, Stefan Lutz

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 1 institution in 1 country.

Monica L GerthDepartment of Chemistry, Emory University, 1515 Dickey Drive, Atlanta, GA 30322, USA.
Stefan Lutz
Emory University · US

Funding

Virology and Molecular Biomarkers CoreP30AI050409 · NIAID · EMORY UNIVERSITY · PI Carlos del Rio · 2002 to 2026
$74.0M
Improving nucleoside phosphorylation with hybrid kinasesR01GM069958 · NIGMS · EMORY UNIVERSITY · PI LUTZ, STEFAN · 2005 to 2009
$1.2M
NIAID NIH HHS AI050409NIAID NIH HHS P30 AI050409NIGMS NIH HHS GM69958NIGMS NIH HHS R01 GM069958
6 · The paper itself

Abstract

In antiviral and cancer therapy, deoxyribonucleoside kinases (dNKs) are often the rate-limiting step in activating nucleoside analog (NA) prodrugs into their cytotoxic, phosphorylated forms. We have constructed libraries of hybrid enzymes by non-homologous recombination of the pyrimidine-specific human thymidine kinase 2 and the broad-specificity dNK from Drosophila melanogaster; their low sequence identity has precluded engineering by conventional, homology-dependent shuffling techniques. From these libraries, we identified chimeras that phosphorylate nucleoside analogs with higher activity than either parental enzyme, and that possess new activity towards the anti-HIV prodrug 2',3'-didehydro-3'-deoxythymidine (d4T). These results demonstrate the potential of non-homologous recombination within the dNK family for creating enzymes with new and improved activities towards nucleoside analogs. In addition, our results exposed a previously unknown role for the C-terminal regions of these dNKs in determining substrate selectivity.

Indexed as

AnimalsDatabases, Nucleic AcidDeoxyribonucleosidesDrosophila melanogasterHumansKineticsModels, MolecularPhosphorylationPhosphotransferases (Alcohol Group Acceptor)Protein Structure, TertiaryRecombinant ProteinsRecombination, GeneticStructural Homology, ProteinSubstrate SpecificityThymidine Kinasedeoxyribonucleoside kinasesDeoxyribonucleosidesPhosphotransferases (Alcohol Group Acceptor)Recombinant ProteinsThymidine Kinase

Identifiers

PMID17543337
PMCPMC1986717
OpenAlexW1988346413

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.