Evidence map›Paper›PMID 17543297›Full record

ArticleDevelopmental biology2007

Essential role of lysyl oxidases in notochord development.

John M Gansner, Bryce A Mendelsohn, Keith A Hultman, Stephen L Johnson, Jonathan D Gitlin

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 85 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Lysyl Oxidase Family Proteins: Prospective Therapeutic Targets in Cancer.International journal of molecular sciences · 2022
    Review
  5. Review
  6. Development of a straight vertebrate body axis.Development (Cambridge, England) · 2020
    Review
  7. Zebrafish: An Emerging Model for Orthopedic Research.Journal of orthopaedic research : official publication of the Orthopaedic Research Society · 2020
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. The notochord: structure and functions.Cellular and molecular life sciences : CMLS · 2015
    Review
  13. Origin and evolution of lysyl oxidases.Scientific reports · 2015
    Article
  14. Article
  15. Modulation of the secretory pathway rescues zebrafish polycystic kidney disease pathology.Journal of the American Society of Nephrology : JASN · 2014
    Article
  16. Article
  17. Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

John M GansnerDepartment of Pediatrics, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Bryce A Mendelsohn
Keith A Hultman
Stephen L Johnson
Jonathan D Gitlin
Washington University in St. Louis · US

Funding

NATIONAL RESEARCH SERVICE AWARD-MEDICAL SCIENTISTT32GM007200 · NIGMS · WASHINGTON UNIVERSITY · PI YOKOYAMA, WAYNE M. · 1985 to 2024
$59.8M
REGULATION OF ADULT STEM CELLS IN ZEBRAFISHR01GM056988 · NIGMS · WASHINGTON UNIVERSITY · PI JOHNSON, STEPHEN L · 1998 to 2016
$6.0M
Mutational analysis of overgrowth of the zebrafish finP01HD039952 · NICHD · WASHINGTON UNIVERSITY · PI GITLIN, JONATHAN DAVID · 2001 to 2005
$5.7M
Biological Roles of Copper in Human NutritionR37DK044464 · NIDDK · WASHINGTON UNIVERSITY · PI GITLIN, JONATHAN DAVID · 2006 to 2015
$3.1M
THE ROLE OF COPPER IN PEDIATRIC LIVER DISEASER01DK061763 · NIDDK · WASHINGTON UNIVERSITY · PI GITLIN, JONATHAN DAVID · 2001 to 2009
$2.4M
BIOLOGICAL ROLES OF COPPER IN HUMAN NUTRITIONR01DK044464 · NIDDK · WASHINGTON UNIVERSITY · PI GITLIN, JONATHAN DAVID · 1992 to 2004
$1.5M
Genetics of latent zebrafish melanoblastsR56GM056988 · NIGMS · WASHINGTON UNIVERSITY · PI JOHNSON, STEPHEN L · 2007 to 2007
$406k
NICHD NIH HHS HD39952NICHD NIH HHS P01 HD039952NIDDK NIH HHS DK44464NIDDK NIH HHS DK61763NIDDK NIH HHS R01 DK044464NIDDK NIH HHS R01 DK061763NIDDK NIH HHS R37 DK044464NIGMS NIH HHS GM56988NIGMS NIH HHS R01 GM056988NIGMS NIH HHS R56 GM056988NIGMS NIH HHS T32 GM007200NIGMS NIH HHS T32 GM07200
6 · The paper itself

Abstract

Recent studies reveal a critical role for copper in the development of the zebrafish notochord, suggesting that specific cuproenzymes are required for the structural integrity of the notochord sheath. We now demonstrate that beta-aminopropionitrile, a known inhibitor of the copper-dependent lysyl oxidases, causes notochord distortion in the zebrafish embryo identical to that seen in copper deficiency. Characterization of the zebrafish lysyl oxidase genes reveals eight unique sequences, several of which are expressed in the developing notochord. Specific gene knockdown demonstrates that loss of loxl1 results in notochord distortion, and that loxl1 and loxl5b have overlapping roles in notochord formation. Interestingly, while notochord abnormalities are not observed following partial knockdown of loxl1 or loxl5b alone, in each case this markedly sensitizes developing embryos to notochord distortion if copper availability is diminished. Likewise, partial knockdown of the lysyl oxidase substrate col2a1 results in notochord distortion when combined with reduced copper availability or partial knockdown of loxl1 or loxl5b. These data reveal a complex interplay of gene expression and nutrient availability critical to notochord development. They also provide insight into specific genetic and nutritional factors that may play a role in the pathogenesis of structural birth defects of the axial skeleton.

Indexed as

AnimalsBase SequenceCollagen Type IIDNA PrimersGene Expression Regulation, DevelopmentalGene Expression Regulation, EnzymologicModels, BiologicalNotochordPhenotypeProtein-Lysine 6-OxidaseRNA, AntisenseZebrafishZebrafish ProteinsCollagen Type IIDNA PrimersProtein-Lysine 6-OxidaseRNA, AntisenseZebrafish Proteins

Identifiers

PMID17543297
PMCPMC2467443
OpenAlexW2023990776

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.