Evidence map›Paper›PMID 17541681›Full record

ArticleJournal of molecular evolution2007

Selective pressures on Drosophila chemosensory receptor genes.

Narelle E Tunstall, Tamara Sirey, Richard D Newcomb, Coral G Warr

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Article in Journal of molecular evolution, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Article
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  11. Antennal transcriptome of Manduca sexta.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  12. Functional and molecular evolution of olfactory neurons and receptors for aliphatic esters across the Drosophila genus.Journal of comparative physiology. A, Neuroethology, sensory, neural, and behavioral physiology · 2010
    Article
  13. Article
  14. Odor detection in insects: volatile codes.Journal of chemical ecology · 2008
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Narelle E TunstallSchool of Biological Sciences, Monash University, Wellington Road, Clayton, VIC, Australia.
Tamara Sirey
Richard D Newcomb
Coral G Warr

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The evolution and patterns of selection of genes encoding 10 Drosophila odorant receptors (Or) and the sex pheromone receptor Gr68a were investigated by comparing orthologous sequences across five to eight ecologically diverse species of Drosophila. Using maximum likelihood estimates of dN/dS ratios we show that all 11 genes sampled are under purifying selection, indicating functional constraint. Four of these genes (Or33c, Or42a, Or85e, and Gr68a) may be under positive selection, and if so, there is good evidence that 12 specific amino acid sites may be under positive selection. All of these sites are predicted to be located either in loop regions or just inside membrane spanning regions, and interestingly one of the two sites in Gr68a is in a similar position to a previously described polymorphism in Gr5a that causes a shift in sensitivity to its ligand trehalose. For three Ors, possible evidence for positive selection was detected along a lineage. These include Or22a in the lineage leading to D. mauritiana and Or22b in the lineage leading to D. simulans. This is of interest in light of previous data showing a change in ligand response profile for these species in the sensory neuron (ab3A) which expresses both Or22a and Or22b in D. melanogaster. In summary, while the main chemosensory function and/or structural integrity of these 10 Or genes and Gr68a are evolutionarily preserved, positive selection appears to be acting on some of these genes, at specific sites and along certain lineages, and provides testable hypotheses for further functional experimentation.

Indexed as

Selection, GeneticAmino AcidsAnimalsDrosophila melanogasterGene DuplicationGenes, InsectLikelihood FunctionsPhylogenyPseudogenesReceptors, OdorantReceptors, PheromoneSequence Homology, Nucleic AcidAmino AcidsReceptors, OdorantReceptors, Pheromone

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.