Evidence map›Paper›PMID 17540412›Full record

ArticleMathematical biosciences2007

Statistical properties of ion channel records. Part I: relationship to the macroscopic current.

Ali Nekouzadeh, Yoram Rudy

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Article in Mathematical biosciences, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

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0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Ali NekouzadehCardiac Bioelectricity and Arrhythmia Center, Washington University in St. Louis, 290 Whitaker Hall, Campus Box 1097, One Brooking Drive, St. Louis, MO 63130-4899, USA. ali@biomed.wustl.edu
Yoram Rudy

Funding

CARDIAC EXCITATION AND ARRHYTHMIASR01HL049054 · NHLBI · WASHINGTON UNIVERSITY · PI RUDY, YORAM · 1993 to 2017
$5.8M
INVERSE AND FORWARD PROBLEMS IN ELECTROCARDIOGRAPHYR37HL033343 · NHLBI · WASHINGTON UNIVERSITY · PI RUDY, YORAM · 1998 to 2007
$2.0M
NHLBI NIH HHS R01 HL049054NHLBI NIH HHS R01-HL 49054NHLBI NIH HHS R37 HL033343NHLBI NIH HHS R37-HL 33343
6 · The paper itself

Abstract

Macroscopic ion channel current can be derived by summation of the stochastic records of individual channel currents. In this paper, we present two probability density functions of single channel records that can uniquely determine the macroscopic current regardless of other statistical properties of records or the stochastic model of channel gating (presented often with stationary Markov models). We show that H(t), probability density function of channel opening events (introduced explicitly in this paper), and D(t), probability density function of the open duration (sometimes has named dwell time distribution as well), determine the normalized macroscopic current, G(t), through G(t) = P(t) - H(t) * Q(t) where P(t) is the cumulative density function of H(t), Q(t) is the cumulative density function of D(t), * is the symbol of convolution integral and G(t) is the macroscopic current divided by the amplitude of single channel current and the number of single channel sweeps. Compared to other equations for the macroscopic current, here the macroscopic current is expressed only in terms of the statistical properties of single channel current and not the stochastic model of ion channel gating or a conditioned form of macroscopic current. Single channel currents of an inactivating BK channel were used to validate this relationship experimentally too. In this paper, we used median filters as they can remove the unwanted noise without smoothing the transitions between open and closed states (compare to low pass filters). This filtering leads to more accurate measurement of transition times and less amount of missed events.

Indexed as

Models, BiologicalIon Channel GatingIon ChannelsLarge-Conductance Calcium-Activated Potassium ChannelsMarkov ChainsMathematicsPatch-Clamp TechniquesProbabilityStochastic ProcessesIon ChannelsLarge-Conductance Calcium-Activated Potassium Channels

Identifiers

PMID17540412
PMCPMC2121577

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.