Evidence map›Paper›PMID 17540325›Full record

ArticleAnalytical biochemistry2007

A multienzyme bioluminescent time-resolved pyrophosphate assay.

Ye Sun, K Bruce Jacobson, Val Golovlev

Abstract read
In one paragraph

Article in Analytical biochemistry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Observational
  3. Article
  4. Transient model of thermal deactivation of enzymes.Biochimica et biophysica acta · 2011
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Ye SunSci-Tec, Inc., 10425 Cogdill Road, Suite 300, Knoxville, TN 37932, USA.
K Bruce Jacobson
Val Golovlev

Funding

SUPPORT FOR CONTINUOUS RESEARCH EXCELLENCES06GM008003 · NIGMS · SOUTHEASTERN OKLAHOMA STATE UNIVERSITY · PI PAIVA, NANCY · 1989 to 2007
$1.3M
BIOLUMINESCENT ASSAY FOR GENE EXPRESSION ANALYSISR44GM080037 · NIGMS · SCI-TEC, INC. · PI GOLOVLEV, VAL V. · 2008 to 2009
$729k
Bioluminscence Assay for Gene Expression AnalysisR43GM080037 · NIGMS · SCI-TEC, INC. · PI GOLOVLEV, VAL V. · 2006 to 2006
$100k
NIGMS NIH HHS GM080037ANIGMS NIH HHS R43 GM080037NIGMS NIH HHS R44 GM080037
6 · The paper itself

Abstract

We have developed a high-sensitivity assay for measurement of inorganic pyrophosphate (PPi) in adenosine 5'-triphosphate (ATP)-contaminated samples. The assay is based on time-resolved measurements of the luminescence kinetics and implements multiple enzymes to convert PPi to ATP that is, in turn, utilized to produce light and to hydrolyze PPi for measurement of the steady state background luminescence. A theoretical model for describing luminescence kinetics and optimizing composition of the assay detection mixture is presented. We found that the model is in excellent agreement with the experimental results. We have developed and evaluated two algorithms for PPi measurement from luminescence kinetics acquired from ATP-contaminated samples. The first algorithm is considered to be the method of choice for analysis of long, i.e., 3-5 min, kinetics. The activity of enzymes is controlled during the experiment; the sensitivity of PPi detection is about 7 pg/ml or 15 pM of PPi in ATP-contaminated samples. The second algorithm is designed for analysis of short, i.e., less than 1-min, luminescence kinetics. It has about 20 pM PPi detection sensitivity and may be the better choice for assays in microplate format, where a short measurement time is required. The PPi assay is primarily developed for RNA expression analysis, but it also can be used in various applications that require high-sensitivity PPi detection in ATP-contaminated samples.

Indexed as

Adenosine TriphosphateAlgorithmsDiphosphatesKineticsLuciferasesLuminescent MeasurementsReverse TranscriptionSensitivity and SpecificityAdenosine TriphosphateDiphosphatesLuciferases

Identifiers

PMID17540325
PMCPMC2737329

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.