ArticleJournal of biosciences2007
Complexity of rice Hsp100 gene family: lessons from rice genome sequence data.
Article in Journal of biosciences, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.
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Who cites it
10 citing papers in PubMed.
- Combined transcriptomics and metabolomics analysis reveals the molecular mechanism of heat tolerance of Le023M, a mutant inHeliyon · 2023Article
- Drought Stress Pre-Treatment Triggers Thermotolerance Acquisition in Durum Wheat.International journal of molecular sciences · 2022Article
- Heat stress inducible cytoplasmic isoform of ClpB1 from Z. nummularia exhibits enhanced thermotolerance in transgenic tobacco.Molecular biology reports · 2020Article
- Rice Improvement Through Genome-Based Functional Analysis and Molecular Breeding in India.Rice (New York, N.Y.) · 2016Article
- Hsf and Hsp gene families in Populus: genome-wide identification, organization and correlated expression during development and in stress responses.BMC genomics · 2015Article
- Heat shock proteins in relation to heat stress tolerance of creeping bentgrass at different N levels.PloS one · 2014Article
- Plant Hsp100/ClpB-like proteins: poorly-analyzed cousins of yeast ClpB machine.Plant molecular biology · 2010Article
- Genome-wide analysis of rice ClpB/HSP100, ClpC and ClpD genes.BMC genomics · 2010Article
- Rice sHsp genes: genomic organization and expression profiling under stress and development.BMC genomics · 2009Article
- Genetic engineering for heat tolerance in plants.Physiology and molecular biology of plants : an international journal of functional plant biology · 2008Article
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Authors and funding
5 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Elucidation of genome sequence provides an excellent platform to understand detailed complexity of the various gene families. Hsp100 is an important family of chaperones in diverse living systems. There are eight putative gene loci encoding for Hsp100 proteins in Arabidopsis genome. In rice, two full-length Hsp100 cDNAs have been isolated and sequenced so far. Analysis of rice genomic sequence by in silico approach showed that two isolated rice Hsp100 cDNAs correspond to Os05g44340 and Os02g32520 genes in the rice genome database. There appears to be three additional proteins (encoded by Os03g31300, Os04g32560 and Os04g33210 gene loci) that are variably homologous to Os05g44340 and Os02g32520 throughout the entire amino acid sequence. The above five rice Hsp100 genes show significant similarities in the signature sequences known to be conserved among Hsp100 proteins. While Os05g44340 encodes cytoplasmic Hsp100 protein, those encoded by the other four genes are predicted to have chloroplast transit peptides.
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