Evidence map›Paper›PMID 17535921›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Designing an extracellular matrix protein with enhanced mechanical stability.

Sean P Ng, Kate S Billings, Tomoo Ohashi, Mark D Allen, Robert B Best, Lucy G Randles, Harold P Erickson, Jane Clarke

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
7.6field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 77 citations in OpenAlex.

  1. Article
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  5. Contribution of hydrophobic interactions to protein mechanical stability.Computational and structural biotechnology journal · 2022
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  20. Single-molecule force spectroscopy distinguishes target binding modes of calmodulin.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Sean P NgCambridge University Chemical Laboratory, Medical Research Council Centre for Protein Engineering, Lensfield Road, Cambridge CB2 1EW, United Kingdom.
Kate S Billings
Tomoo Ohashi
Mark D Allen
Robert B Best
Lucy G Randles
Harold P Erickson
Jane Clarke
University of Cambridge · GBMedical Research Council · GBDuke Medical Center · USDuke University Hospital · US

Funding

EXTRACELLULAR MATRIX AND CELL ATTACHMENT PROTEINSR01CA047056 · NCI · DUKE UNIVERSITY · PI ERICKSON, HAROLD P · 1988 to 2016
$4.7M
EXTRACELLULAR MATRIX AND CELL ATTACHMENT PROTEINSR37CA047056 · NCI · DUKE UNIVERSITY · PI ERICKSON, HAROLD P · 1993 to 2000
$308k
NCI NIH HHS CA47056NCI NIH HHS R01 CA047056NCI NIH HHS R37 CA047056Wellcome Trust 064417
6 · The paper itself

Abstract

The extracellular matrix proteins tenascin and fibronectin experience significant mechanical forces in vivo. Both contain a number of tandem repeating homologous fibronectin type III (fnIII) domains, and atomic force microscopy experiments have demonstrated that the mechanical strength of these domains can vary significantly. Previous work has shown that mutations in the core of an fnIII domain from human tenascin (TNfn3) reduce the unfolding force of that domain significantly: The composition of the core is apparently crucial to the mechanical stability of these proteins. Based on these results, we have used rational redesign to increase the mechanical stability of the 10th fnIII domain of human fibronectin, FNfn10, which is directly involved in integrin binding. The hydrophobic core of FNfn10 was replaced with that of the homologous, mechanically stronger TNfn3 domain. Despite the extensive substitution, FNoTNc retains both the three-dimensional structure and the cell adhesion activity of FNfn10. Atomic force microscopy experiments reveal that the unfolding forces of the engineered protein FNoTNc increase by approximately 20% to match those of TNfn3. Thus, we have specifically designed a protein with increased mechanical stability. Our results demonstrate that core engineering can be used to change the mechanical strength of proteins while retaining functional surface interactions.

Indexed as

Models, MolecularProtein ConformationAmino Acid SequenceBiophysical PhenomenaBiophysicsCell AdhesionCrystallizationFibronectinsHumansMicroscopy, Atomic ForceMolecular Sequence DataMutationProtein EngineeringProtein Structure, TertiarySequence AlignmentTenascinFibronectinsTenascin

Identifiers

PMID17535921
PMCPMC1887552
OpenAlexW2092832320

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.