Evidence map›Paper›PMID 17535905›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Target mRNAs are repressed as efficiently by microRNA-binding sites in the 5' UTR as in the 3' UTR.

J Robin Lytle, Therese A Yario, Joan A Steitz

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 626 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
626citing papers in PubMed, 1 pooled it
23.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

626 citing papers in PubMed, 1 synthesis or guideline pooled it, 1,194 citations in OpenAlex.

  1. Pooled it
  2. Effect of Whole-Brain and Intensity-Modulated Radiotherapy on Serum Levels of miR-21 and Prognosis for Lung Cancer Metastatic to the Brain.Medical science monitor : international medical journal of experimental and clinical research · 2020
    Trial
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Review
  9. MicroRNAs and Their Profiling via Single-Cell Sequencing Technologies.Methods in molecular biology (Clifton, N.J.) · 2026
    Review
  10. Article
  11. Epigenetic Regulation of RUNX2 in Bone Mechanobiology.Results and problems in cell differentiation · 2026
    Review
  12. Review
  13. Review
  14. Review
  15. Article
  16. Article
  17. Article
  18. Review
  19. Review
  20. Review

566 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

J Robin LytleDepartment of Molecular Biophysics and Biochemistry, Howard Hughes Medical Institute, Yale University School of Medicine, New Haven, CT 06536, USA.
Therese A Yario
Joan A Steitz
Howard Hughes Medical Institute · USYale University · US

Funding

Vertebrate Non-Coding RNPs: Integrating function, biogenesis and survivalR01GM026154 · NIGMS · YALE UNIVERSITY · PI STEITZ, JOAN A. · 1985 to 2014
$4.0M
The Effect of Nonsense Mediated Decay on mRNA SplicingF32GM067478 · NIGMS · YALE UNIVERSITY · PI LYTLE, JENNIFER R · 2003 to 2005
$125k
AUTOANTIBODY PROBES FOR MAMMALIAN GENE EXPRESSIONR37GM026154 · NIGMS · YALE UNIVERSITY · PI STEITZ, JOAN A. · 1989 to 1998
–
NIGMS NIH HHS F32 GM067478NIGMS NIH HHS F32 GM67478NIGMS NIH HHS GM26154NIGMS NIH HHS R01 GM026154
6 · The paper itself

Abstract

In animals, microRNAs (miRNAs) bind to the 3' UTRs of their target mRNAs and interfere with translation, although the exact mechanism of inhibition of protein synthesis remains unclear. Functional miRNA-binding sites in the coding regions or 5' UTRs of endogenous mRNAs have not been identified. We studied the effect of introducing miRNA target sites into the 5' UTR of luciferase reporter mRNAs containing internal ribosome entry sites (IRESs), so that potential steric hindrance by a microribonucleoprotein complex would not interfere with the initiation of translation. In human HeLa cells, which express endogenous let-7a miRNA, the translational efficiency of these IRES-containing reporters with 5' let-7 complementary sites from the Caenorhabditis elegans lin-41 3' UTR was repressed. Similarly, the IRES-containing reporters were translationally repressed when human Ago2 was tethered to either the 5' or 3' UTR. Interestingly, the method of DNA transfection affected our ability to observe miRNA-mediated repression. Our results suggest that association with any position on a target mRNA is mechanistically sufficient for a microribonucleoprotein to exert repression of translation at some step downstream of initiation.

Indexed as

Gene Expression Regulation5' Untranslated RegionsAnimalsArgonaute ProteinsBase SequenceCaenorhabditis elegans ProteinsEukaryotic Initiation Factor-2HeLa CellsHumansLuciferasesMicroRNAsMolecular Sequence DataProtein BiosynthesisRibonucleoproteinsTranscription FactorsTransfection5' Untranslated RegionsAGO2 protein, humanArgonaute ProteinsCaenorhabditis elegans ProteinsEukaryotic Initiation Factor-2LIN-41 protein, C elegansLuciferasesMicroRNAsmirnlet7 microRNA, humanRibonucleoproteinsTranscription Factors

Identifiers

PMID17535905
PMCPMC1887587
OpenAlexW2116799486

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.