Evidence map›Paper›PMID 17534440›Full record

ArticlePloS one2007

Experimental selection for Drosophila survival in extremely low O(2) environment.

Dan Zhou, Jin Xue, Jianming Chen, Patrick Morcillo, J David Lambert, Kevin P White, Gabriel G Haddad

Abstract read
In one paragraph

Article in PloS one, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. The Pupa Stage Is the Most Sensitive to Hypoxia inInternational journal of molecular sciences · 2024
    Article
  5. Article
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  7. Article
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  9. Article
  10. Article
  11. Evolutionary responses ofFrontiers in ecology and evolution · 2018
    Article
  12. Article
  13. Reduced CardiacCirculation. Cardiovascular genetics · 2017
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Dan ZhouDepartment of Pediatrics, Section of Respiratory Medicine, and Neuroscience, University of California San Diego, La Jolla, California, United States of America.
Jin Xue
Jianming Chen
Patrick Morcillo
J David Lambert
Kevin P White
Gabriel G Haddad

Funding

THE IMPACT OF HYPOXIA ON DEVELOPMENT AND REMODELING OF CARDIC INTERCALATED DISKP01HD032573 · NICHD · YALE UNIVERSITY · PI HADDAD, GABRIEL G · 1995 to 2009
$12.1M
MOLECULAR BASIS OF CELL TOLERANCE TO 02 DEPRIVATIONR01NS037756 · NINDS · YESHIVA UNIVERSITY · PI HADDAD, GABRIEL G · 2000 to 2009
$4.1M
NICHD NIH HHS P01 HD032573NICHD NIH HHS P01HD032573NINDS NIH HHS R01 NS037756NINDS NIH HHS R01NS037756
6 · The paper itself

Abstract

backgroundCellular hypoxia, if severe enough, results usually in injury or cell death. Our research in this area has focused on the molecular mechanisms underlying hypoxic tissue injury to explore strategies to prevent injury or enhance tolerance. The current experiments were designed to determine the genetic basis for adaptation to long term low O(2) environments. METHODOLOGY/PRINCIPAL

findingsWith long term experimental selection over many generations, we obtained a Drosophila melanogaster strain that can live perpetually in extremely low, normally lethal, O(2) condition (as low as 4% O(2)). This strain shows a dramatic phenotypic divergence from controls, including a decreased recovery time from anoxic stupor, a higher rate of O(2 )consumption in hypoxic conditions, and a decreased body size and mass due to decreased cell number and size. Expression arrays showed that about 4% of the Drosophila genome altered in expression and about half of the alteration was down-regulation. The contribution of some altered transcripts to hypoxia tolerance was examined by testing the survival of available corresponding P-element insertions (and their excisions) under extremely low O(2) conditions. We found that down-regulation of several candidate genes including Best1, broad, CG7102, dunce, lin19-like and sec6 conferred severe hypoxia tolerance in Drosophila. CONCLUSIONS/SIGNIFICANCE: We have identified a number of genes that play an important role in the survival of a selected Drosophila strain in extremely low O(2) conditions, selected by decreasing O(2) availability over many generations. Because of conservation of pathways, we believe that such genes are critical in hypoxia adaptation in physiological or pathological conditions not only in Drosophila but also in mammals.

Indexed as

OxygenSelection, GeneticAnimalsBase SequenceDNA, ComplementaryDNA PrimersDrosophila melanogasterHypoxiaMaleMutationOligonucleotide Array Sequence AnalysisPhenotypeDNA, ComplementaryDNA PrimersOxygen

Identifiers

PMID17534440
PMCPMC1871610

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.