Evidence map›Paper›PMID 17533513›Full record

ArticlePlant molecular biology2007

The moss genes PpSKI1 and PpSKI2 encode nuclear SnRK1 interacting proteins with homologues in vascular plants.

Mattias Thelander, Anders Nilsson, Tina Olsson, Monika Johansson, Pierre-Alain Girod, Didier G Schaefer, Jean-Pierre Zrÿd, Hans Ronne

Abstract read
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Article in Plant molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
4.1field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 42 citations in OpenAlex.

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  15. Article
  16. The Arabidopsis thaliana Med25 mediator subunit integrates environmental cues to control plant development.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  17. Article
  18. Rescue and characterization of episomally replicating DNA from the moss Physcomitrella.Proceedings of the National Academy of Sciences of the United States of America · 2009
    Article
  19. Article
  20. Sugar sensing and signaling.The arabidopsis book · 2008
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Mattias ThelanderDepartment of Plant Biology and Forest Genetics, Swedish University of Agricultural Sciences, Uppsala, Sweden. Mattias.Thelander@vbsg.slu.se
Anders Nilsson
Tina Olsson
Monika Johansson
Pierre-Alain Girod
Didier G Schaefer
Jean-Pierre Zrÿd
Hans Ronne
University of Lausanne · CHUppsala University · SESwedish University of Agricultural Sciences · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The yeast Snf1, animal AMPK, and plant SnRK1 protein kinases constitute a family of related proteins that have been proposed to serve as metabolic sensors of the eukaryotic cell. We have previously reported the characterization of two redundant SnRK1 encoding genes (PpSNF1a and PpSNF1b) in the moss Physcomitrella patens. Phenotypic analysis of the snf1a snf1b double knockout mutant suggested that SnRK1 is important for the plant's ability to recognize and adapt to conditions of limited energy supply, and also suggested a possible role of SnRK1 in the control of plant development. We have now used a yeast two-hybrid system to screen for PpSnf1a interacting proteins. Two new moss genes were found, PpSKI1 and PpSKI2, which encode highly similar proteins with homologues in vascular plants. Fusions of the two encoded proteins to the green fluorescent protein localize to the nucleus. Knockout mutants for either gene have an excess of gametophores under low light conditions, and exhibit reduced gametophore stem lengths. Possible functions of the new proteins and their connection to the SnRK1 kinase are discussed.

Indexed as

Amino Acid SequenceBryophytaConserved SequenceGene DeletionGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGenotypeMolecular Sequence DataMultigene FamilyProtein Serine-Threonine KinasesReverse Transcriptase Polymerase Chain ReactionSaccharomyces cerevisiaeSequence AlignmentSequence Homology, Amino AcidProtein Serine-Threonine KinasesSNF1-related protein kinases

Identifiers

PMID17533513
OpenAlexW2023197901

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.