Evidence map›Paper›PMID 17532340›Full record

ArticleJournal of molecular biology2007

Folding amphipathic helices into membranes: amphiphilicity trumps hydrophobicity.

Mónica Fernández-Vidal, Sajith Jayasinghe, Alexey S Ladokhin, Stephen H White

Abstract read
In one paragraph

Article in Journal of molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed.

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24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Mónica Fernández-VidalDepartment of Physiology and Biophysics, University of California at Irvine, Irvine, CA 92697-4560, USA.
Sajith Jayasinghe
Alexey S Ladokhin
Stephen H White

Funding

Membrane Protein Folding and AssemblyR01GM074637 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI WHITE, STEPHEN H. · 2006 to 2020
$4.5M
pH-Triggered Membrane Insertion of ProteinsR01GM069783 · NIGMS · UNIVERSITY OF KANSAS MEDICAL CENTER · PI COCCO, MELANIE J, KURNIKOVA, MARIA G · 2004 to 2014
$2.5M
FLUID BILAYER INTERACTIONS WITH PEPTIDESR01GM046823 · NIGMS · UNIVERSITY OF CALIFORNIA IRVINE · PI WHITE, STEPHEN H. · 1992 to 2004
$1.3M
NIGMS NIH HHS R01 GM046823NIGMS NIH HHS R01 GM069783NIGMS NIH HHS R01 GM074637
6 · The paper itself

Abstract

High amphiphilicity is a hallmark of interfacial helices in membrane proteins and membrane-active peptides, such as toxins and antimicrobial peptides. Although there is general agreement that amphiphilicity is important for membrane-interface binding, an unanswered question is its importance relative to simple hydrophobicity-driven partitioning. We have examined this fundamental question using measurements of the interfacial partitioning of a family of 17-residue amidated-acetylated peptides into both neutral and anionic lipid vesicles. Composed only of Ala, Leu, and Gln residues, the amino acid sequences of the peptides were varied to change peptide amphiphilicity without changing total hydrophobicity. We found that peptide helicity in water and interface increased linearly with hydrophobic moment, as did the favorable peptide partitioning free energy. This observation provides simple tools for designing amphipathic helical peptides. Finally, our results show that helical amphiphilicity is far more important for interfacial binding than simple hydrophobicity.

Indexed as

Protein Structure, SecondaryProtein Structure, TertiaryCell MembraneHydrophobic and Hydrophilic InteractionsMembrane LipidsModels, MolecularPeptidesProtein FoldingSurface-Active AgentsThermodynamicsMembrane LipidsPeptidesSurface-Active Agents

Identifiers

PMID17532340
PMCPMC2034331

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.