Evidence map›Paper›PMID 17526643›Full record

ArticleRNA (New York, N.Y.)2007

Depletion of newly synthesized Argonaute1 impairs the RNAi response in Trypanosoma brucei.

Huafang Shi, Christian Tschudi, Elisabetta Ullu

Open access · bronzeAbstract read
In one paragraph

Article in RNA (New York, N.Y.), 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.1field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Pseudogene-derived small interference RNAs regulate gene expression in African Trypanosoma brucei.Proceedings of the National Academy of Sciences of the United States of America · 2011
    Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. RNA interference in infectious tropical diseases.The Korean journal of parasitology · 2008
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Huafang ShiDepartment of Internal Medicine, Yale University Medical School, New Haven, CT 06536-0812, USA.
Christian Tschudi
Elisabetta Ullu
Yale University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In Trypanosoma brucei, Argonaute1 (TbAGO1) is an essential component of the RNA interference (RNAi) pathway. While characterizing a TbAGO1 conditional knockout cell line, we discovered that, upon blockage of TbAGO1 transcription, the RNAi response to transfected double-stranded RNA was severely inhibited, although there was no change in the TbAGO1 protein level. This observation suggested that steady-state TbAGO1 was not sufficient to fully support the RNAi response to transfected dsRNA and implicated newly synthesized Argonaute in this phenomenon. Indeed, a translational blockade of TbAGO1 mRNA with an antisense morpholino oligonucleotide resulted in inhibition of the RNAi response, even though the steady-state level of TbAGO1 remained unchanged during the time of the assay. Thus, we concluded that in T. brucei, newly synthesized TbAGO1 is required to support an efficient RNAi response. We speculate that newly processed siRNAs may be preferentially loaded onto newly synthesized TbAGO1, and this mechanism may contribute to the homeostasis of the RNAi pathway.

Indexed as

RNA InterferenceAnimalsAnimals, Genetically ModifiedArgonaute ProteinsCell LineGene Expression RegulationProtein BiosynthesisRNA-Binding ProteinsRNA, MessengerTrypanosoma brucei bruceiAGO1 protein, Trypanosoma bruceiArgonaute ProteinsRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID17526643
PMCPMC1894921
OpenAlexW2112038443

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.