Evidence map›Paper›PMID 17519035›Full record

ArticleBMC urology2007

Bladder inflammatory transcriptome in response to tachykinins: neurokinin 1 receptor-dependent genes and transcription regulatory elements.

Ricardo Saban, Cindy Simpson, Rajanikanth Vadigepalli, Sylvie Memet, Igor Dozmorov, Marcia R Saban

Open access · goldAbstract read
In one paragraph

Article in BMC urology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.5field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 21 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Ricardo SabanDepartment of Physiology, The University Oklahoma Health Sciences Center, Oklahoma City, OK 73104, USA. ricardo-saban@ouhsc.edu
Cindy Simpson
Rajanikanth Vadigepalli
Sylvie Memet
Igor Dozmorov
Marcia R Saban
University of Oklahoma Health Sciences Center · USCentre National de la Recherche Scientifique · FROklahoma Medical Research Foundation · USThomas Jefferson University · US

Funding

LPS-PEPTIDE INTERACTION IN BLADDER INFLAMMATIONR01DK055828 · NIDDK · UNIVERSITY OF TEXAS MEDICAL BR GALVESTON · PI SABAN, RICARDO · 1998 to 2007
$2.1M
Bladder transcriptome in experimental inflammationR01DK066101 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI SABAN, RICARDO · 2003 to 2007
$1.3M
Bladder transcriptome in experimental inflammationR56DK066101 · NIDDK · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI SABAN, RICARDO · 2009 to 2009
$355k
NIDDK NIH HHS DK066101-01NIDDK NIH HHS DK 55828-01NIDDK NIH HHS R01 DK055828NIDDK NIH HHS R01 DK066101NIDDK NIH HHS R56 DK066101
6 · The paper itself

Abstract

backgroundTachykinins (TK), such as substance P, and their neurokinin receptors which are ubiquitously expressed in the human urinary tract, represent an endogenous system regulating bladder inflammatory, immune responses, and visceral hypersensitivity. Increasing evidence correlates alterations in the TK system with urinary tract diseases such as neurogenic bladders, outflow obstruction, idiopathic detrusor instability, and interstitial cystitis. However, despite promising effects in animal models, there seems to be no published clinical study showing that NK-receptor antagonists are an effective treatment of pain in general or urinary tract disorders, such as detrusor overactivity. In order to search for therapeutic targets that could block the tachykinin system, we set forth to determine the regulatory network downstream of NK1 receptor activation. First, NK1R-dependent transcripts were determined and used to query known databases for their respective transcription regulatory elements (TREs).

methodsAn expression analysis was performed using urinary bladders isolated from sensitized wild type (WT) and NK1R-/- mice that were stimulated with saline, LPS, or antigen to provoke inflammation. Based on cDNA array results, NK1R-dependent genes were selected. PAINT software was used to query TRANSFAC database and to retrieve upstream TREs that were confirmed by electrophoretic mobility shift assays.

resultsThe regulatory network of TREs driving NK1R-dependent genes presented cRel in a central position driving 22% of all genes, followed by AP-1, NF-kappaB, v-Myb, CRE-BP1/c-Jun, USF, Pax-6, Efr-1, Egr-3, and AREB6. A comparison between NK1R-dependent and NK1R-independent genes revealed Nkx-2.5 as a unique discriminator. In the presence of NK1R, Nkx2-5 _01 was significantly correlated with 36 transcripts which included several candidates for mediating bladder development (FGF) and inflammation (PAR-3, IL-1R, IL-6, alpha-NGF, TSP2). In the absence of NK1R, the matrix Nkx2-5_02 had a predominant participation driving 8 transcripts, which includes those involved in cancer (EYA1, Trail, HSF1, and ELK-1), smooth-to-skeletal muscle trans-differentiation, and Z01, a tight-junction protein, expression. Electrophoretic mobility shift assays confirmed that, in the mouse urinary bladder, activation of NK1R by substance P (SP) induces both NKx-2.5 and NF-kappaB translocations.

conclusionThis is the first report describing a role for Nkx2.5 in the urinary tract. As Nkx2.5 is the unique discriminator of NK1R-modulated inflammation, it can be imagined that in the near future, new based therapies selective for controlling Nkx2.5 activity in the urinary tract may be used in the treatment in a number of bladder disorders.

Indexed as

AnimalsCystitisFemaleImmunologic FactorsMiceMice, Inbred C57BLProteomeReceptors, Neurokinin-1Regulatory Elements, TranscriptionalTachykininsTranscription FactorsUrinary BladderImmunologic FactorsProteomeReceptors, Neurokinin-1TachykininsTranscription Factors

Identifiers

PMID17519035
PMCPMC1888709
OpenAlexW2156071893

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.