ArticleNucleic acids research2007
RADAR: a web server for RNA data analysis and research.
Article in Nucleic acids research, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
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Who cites it
8 citing papers in PubMed.
- RASS: a web server for RNA alignment in the joint sequence-structure space.Nucleic acids research · 2014Article
- Finding consensus stable local optimal structures for aligned RNA sequences and its application to discovering riboswitch elements.International journal of bioinformatics research and applications · 2014Article
- GraphClust: alignment-free structural clustering of local RNA secondary structures.Bioinformatics (Oxford, England) · 2012Article
- Searching for non-coding RNAs in genomic sequences using ncRNAscout.Genomics, proteomics & bioinformatics · 2012Article
- Article
- Predicting consensus structures for RNA alignments via pseudo-energy minimization.Bioinformatics and biology insights · 2009Article
- Finding 3D motifs in ribosomal RNA structures.Nucleic acids research · 2009Article
- Functionally related transcripts have common RNA motifs for specific RNA-binding proteins in trypanosomes.BMC molecular biology · 2008Article
Corrections and comments
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Authors and funding
5 authors.
Funding
Abstract
RADAR is a web server that provides a multitude of functionality for RNA data analysis and research. It can align structure-annotated RNA sequences so that both sequence and structure information are taken into consideration during the alignment process. This server is capable of performing pairwise structure alignment, multiple structure alignment, database search and clustering. In addition, RADAR provides two salient features: (i) constrained alignment of RNA secondary structures, and (ii) prediction of the consensus structure for a set of RNA sequences. RADAR will be able to assist scientists in performing many important RNA mining operations, including the understanding of the functionality of RNA sequences, the detection of RNA structural motifs and the clustering of RNA molecules, among others. The web server together with a software package for download is freely accessible at http://datalab.njit.edu/biodata/rna/RSmatch/server.htm and http://www.ccrnp.ncifcrf.gov/~bshapiro/
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.