Evidence map›Paper›PMID 17514684›Full record

ArticleProteomics2007

Identification of biomarkers associated with the development of hepatocellular carcinoma in CuZn superoxide dismutase deficient mice.

Sailaja Elchuri, Mohammed Naeemuddin, Orr Sharpe, William H Robinson, Ting-Ting Huang

Open access · greenAbstract read
In one paragraph

Article in Proteomics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
1.7field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Manganese superoxide dismutase in cancer prevention.Antioxidants & redox signaling · 2014
    Review
  14. Review
  15. Article
  16. Review
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Sailaja ElchuriDepartment of Neurology and Neurological Sciences, Stanford University, Stanford, CA, USA.
Mohammed Naeemuddin
Orr Sharpe
William H Robinson
Ting-Ting Huang
Stanford University · USVA Palo Alto Health Care System · US

Funding

Genetics Modifiers and Longevity of MnSOD MutantsR01AG024400 · NIA · STANFORD UNIVERSITY · PI HUANG, TING-TING · 2004 to 2008
$1.6M
Oxidative Stress and Hepatocellular CarcinomaR01CA122499 · NCI · PALO ALTO VETERANS INSTIT FOR RESEARCH · PI HUANG, TING-TING · 2007 to 2011
$1.3M
NCI NIH HHS R01 CA122499NIA NIH HHS AG24400NIA NIH HHS R01 AG024400
6 · The paper itself

Abstract

To identify biomarkers associated with the development of hepatocellular carcinoma (HCC) in CuZn superoxide dismutase (CuZnSOD, Sod1) deficient mice, 2-DE followed by MS analysis was carried out with liver samples obtained from 18-month-old Sod1-/- and +/+ mice. The intracellular Ca binding protein, regucalcin (RGN), showed a divergent alteration in Sod1-/- samples. Whereas elevated RGN levels were observed in -/- samples with no obvious neoplastic changes, marked reduction in RGN was observed in -/- samples with fully developed HCC. GST mu1 (GSTM1), on the other hand, showed a significant increase only in the neoplastic regions obtained from Sod1-/- livers. No change in GSTM1 was observed in the surrounding normal tissues. Marked reduction was observed in two intracellular lipid transporters, fatty acid binding protein 1 (FABP1) and major urinary protein 11 and 8 (MUP 11&8), in Sod1-/- samples. Analysis of additional samples at 18-22 months of age showed a three-fold increase in enolase activities in Sod1-/- livers. Consistent with previous findings, carbonic anhydrase 3 (CAIII) levels were significantly reduced in Sod1-/- samples, and immunohistochemical analysis revealed that the reduction was not homogenous throughout the lobular structure in the liver.

Indexed as

AnimalsCalcium-Binding ProteinsCarbonic Anhydrase IIICarcinoma, HepatocellularCell Transformation, NeoplasticElectrophoresis, Gel, Two-DimensionalFatty Acid-Binding ProteinsGlutathione TransferaseIntracellular Signaling Peptides and ProteinsLiverMiceMice, KnockoutPhosphopyruvate HydrataseProteinsProteomeSuperoxide DismutaseCalcium-Binding ProteinsCarbonic Anhydrase IIIFabp1 protein, mouseFatty Acid-Binding ProteinsGlutathione TransferaseIntracellular Signaling Peptides and Proteinsmajor urinary proteinsPhosphopyruvate HydrataseProteinsProteomeRgn protein, mouseSuperoxide Dismutase

Identifiers

PMID17514684
PMCPMC2729784
OpenAlexW1973466736

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.