Evidence map›Paper›PMID 17513566›Full record

ArticleEukaryotic cell2007

Genomic and population analyses of the mating type loci in Coccidioides species reveal evidence for sexual reproduction and gene acquisition.

M Alejandra Mandel, Bridget M Barker, Scott Kroken, Steven D Rounsley, Marc J Orbach

Open access · diamondAbstract read
In one paragraph

Article in Eukaryotic cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.9field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 83 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Hiding in plain sight: Genome-wide recombination and a dynamic accessory genome drive diversity inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  5. Review
  6. Coccidioides Species: A Review of Basic Research: 2022.Journal of fungi (Basel, Switzerland) · 2022
    Review
  7. Genetic Networks That Govern Sexual Reproduction in the Pezizomycotina.Microbiology and molecular biology reviews : MMBR · 2021
    Review
  8. Mating Systems in True Morels (Microbiology and molecular biology reviews : MMBR · 2021
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Analysis of Transposable Elements in Coccidioides Species.Journal of fungi (Basel, Switzerland) · 2018
    Article
  14. Sex and the Imperfect Fungi.Microbiology spectrum · 2017
    Review
  15. Article
  16. Article
  17. Review
  18. Clonal reproduction in fungi.Proceedings of the National Academy of Sciences of the United States of America · 2015
    Article
  19. Evolutionary Perspectives on Human Fungal Pathogens.Cold Spring Harbor perspectives in medicine · 2014
    Review
  20. Valley fever: danger lurking in a dust cloud.Microbes and infection · 2014
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

M Alejandra MandelDivision of Plant Pathology and Microbiology, Department of Plant Sciences, University of Arizona, Tucson, AZ 85721, USA.
Bridget M Barker
Scott Kroken
Steven D Rounsley
Marc J Orbach
University of Arizona · USPlant (United States) · US

Funding

Validation of Coccidiodes Target Antigens for ImmunotherapyP01AI061310 · NIAID · UNIVERSITY OF ARIZONA · PI DIAL, SHARON M · 2004 to 2008
$4.1M
NIAID NIH HHS 1 PO 1AI061310-01NIAID NIH HHS P01 AI061310
6 · The paper itself

Abstract

Coccidioides species, the fungi responsible for the valley fever disease, are known to reproduce asexually through the production of arthroconidia that are the infectious propagules. The possible role of sexual reproduction in the survival and dispersal of these pathogens is unexplored. To determine the potential for mating of Coccidioides, we analyzed genome sequences and identified mating type loci characteristic of heterothallic ascomycetes. Coccidioides strains contain either a MAT1-1 or a MAT1-2 idiomorph, which is 8.1 or 9 kb in length, respectively, the longest reported for any ascomycete species. These idiomorphs contain four or five genes, respectively, more than are present in the MAT loci of most ascomycetes. Along with their cDNA structures, we determined that all genes in the MAT loci are transcribed. Two genes frequently found in common sequences flanking MAT idiomorphs, APN2 and COX13, are within the MAT loci in Coccidioides, but the MAT1-1 and MAT1-2 copies have diverged dramatically from each other. Data indicate that the acquisition of these genes in the MAT loci occurred prior to the separation of Coccidioides from Uncinocarpus reesii. An analysis of 436 Coccidioides isolates from patients and the environment indicates that in both Coccidioides immitis and C. posadasii, there is a 1:1 distribution of MAT loci, as would be expected for sexually reproducing species. In addition, an analysis of isolates obtained from 11 soil samples demonstrated that at three sampling sites, strains of both mating types were present, indicating that compatible strains were in close proximity in the environment.

Indexed as

CoccidioidesGenes, Mating Type, FungalGenome, FungalReproductionDNA-(Apurinic or Apyrimidinic Site) LyaseFungal ProteinsMembrane ProteinsNuclear ProteinsPhylogenyTranscription, GeneticDNA-(Apurinic or Apyrimidinic Site) LyaseFungal ProteinsMembrane ProteinsNuclear Proteins

Identifiers

PMID17513566
PMCPMC1951113
OpenAlexW2137416653

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.