Evidence map›Paper›PMID 17511028›Full record

ArticleWorld journal of gastroenterology2007

Expression of SNC73, a transcript of the immunoglobulin alpha-1 gene, in human epithelial carcinomas.

Li-Yi Geng, Zheng-Zhen Shi, Qi Dong, Xin-Han Cai, Yan-Ming Zhang, Wei Cao, Jia-Ping Peng, Yong-Ming Fang, Lei Zheng, Shu Zheng

Open access · hybridAbstract readComparative Study
In one paragraph

Article in World journal of gastroenterology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

  1. Expression and Function of Mammary Epithelial Cell-Derived Immunoglobulins.Advances in experimental medicine and biology · 2024
    Review
  2. Non B Cell-Derived Immunoglobulins in Intestinal Tract.Advances in experimental medicine and biology · 2024
    Review
  3. Functions and Clinical Relevance of Liver-Derived Immunoglobulins.Advances in experimental medicine and biology · 2024
    Review
  4. The Expression of Non B Cell-Derived Immunoglobulins.Advances in experimental medicine and biology · 2024
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Li-Yi GengCancer Institute, Zhejiang University School of Medicine, The Second Affiliated Teaching Hospital, 88 Jiefang Road, Hangzhou 310009, Zhejiang Province, China.
Zheng-Zhen Shi
Qi Dong
Xin-Han Cai
Yan-Ming Zhang
Wei Cao
Jia-Ping Peng
Yong-Ming Fang
Lei Zheng
Shu Zheng
Second Affiliated Hospital of Zhejiang University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo investigate the expression of SNC73, a trans-cript of the immunoglobulin alpha-1 gene (IgA1-H chain), in human epithelia-derived tumor cells.

methodsTotal RNAs and cell lysates were prepared from five different human epithelial cell lines derived from lung, stomach, liver, skin, and breast, respectively. RT-PCR and immunoblot analysis of these five cell lines were done. Both RT-PCR and immunochemistry were used to detect the expression of SNC73 in these cell lines. We also examined the expression of SNC73 in normal epithelial cells of colon mucosa by in situ hybridization. RT-PCR and immunoblot analysis were used to determine whether the recombination activating gene1/2 (RAG1 and RAG2) is present. The expression of three immunoglobulin transcription factors, EBF, E2A and Pax5, and the heavy chain of IgA1 and two types of light chains of immunoglobulin (kappa and lambda) in the aforementioned cell lines were analyzed by RT-PCR and immunochemistry, respectively. All the RT-PCR products were analyzed by sequencing.

resultsThe results of RT-PCR and immunochemistry showed that both mRNA and protein of SNC73 were expressed in five human epithelia-derived cancer cell lines. These data were further confirmed in the normal epithelial cells of colon mucosa by in situ hybridization. Also, the heavy chain of IgA1 and kappa light chain were detected in these cells, but no lambda light chain was obse-rved. Both RAG1 and RAG2 were expressed in these human epithelia-derived cancer cell lines and the sequence was identical to that expressed in pre-B and pre-T cells. In addition to RAG1 and RAG2, the mRNA in one of the immunoglobulin transcription factors, EBF, was also detected in these cell lines, and Pax5 was only expressed in SW480 cells, but no expression of E2A was observed in all the five cell lines.

conclusionImmunoglobulin A1 is originally expressed and V(D)J recombination machine is also present in non-lymphoid cells, suggesting that V(D)J recombination machine mediates the assembly of immunoglobulin A1 in non-lymphoid cells as in pre-lymphocytes.

Indexed as

Breast NeoplasmsCell Line, TumorColonColorectal NeoplasmsDNA-Binding ProteinsEpithelial CellsFemaleGene Expression Regulation, NeoplasticHeLa CellsHomeodomain ProteinsHumansImmunoglobulinsIntestinal MucosaLiver NeoplasmsNuclear ProteinsPAX5 Transcription FactorDNA-Binding ProteinsEBF1 protein, humanHomeodomain ProteinsIGHA1 protein, humanImmunoglobulinsNuclear ProteinsPAX5 protein, humanPAX5 Transcription FactorRAG-1 proteinRAG2 protein, humanTrans-Activators

Identifiers

PMID17511028
PMCPMC4147138
OpenAlexW2052425145

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.