Evidence map›Paper›PMID 17506572›Full record

ArticleOrganic letters2007

Photochemically-activated probes of protein-protein interactions.

Sandip K Nandy, Richard S Agnes, David S Lawrence

Abstract read
In one paragraph

Article in Organic letters, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Targeting collagen strands by photo-triggered triple-helix hybridization.Proceedings of the National Academy of Sciences of the United States of America · 2012
    Article
  2. Article
  3. Light-mediated remote control of signaling pathways.Biochimica et biophysica acta · 2010
    Review
  4. Simultaneous fluorescent monitoring of proteasomal subunit catalysis.Journal of the American Chemical Society · 2010
    Article
  5. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Sandip K NandyDepartment of Biochemistry, The Albert Einstein College of Medicine of Yeshiva University, 1300 Morris Park Avenue, Bronx, New York 10461-1602, USA.
Richard S Agnes
David S Lawrence

Funding

SYNTHETIC REGULATORS OF TYROSINE PROTEIN KINASESR01CA079954 · NCI · YESHIVA UNIVERSITY · PI LAWRENCE, DAVID S. · 1999 to 2016
$4.2M
Chemical Tools for Assessing Intracellular PKA ActivityR01GM067198 · NIGMS · YESHIVA UNIVERSITY · PI LAWRENCE, DAVID S. · 2003 to 2006
$1.5M
NCI NIH HHS CA79954NCI NIH HHS R01 CA079954NIGMS NIH HHS GM067198NIGMS NIH HHS R01 GM067198
6 · The paper itself

Abstract

The activity of light-activatable ("caged") compounds can be temporally and spatially controlled, thereby providing a means to interrogate intracellular biochemical pathways as a function of time and space. Nearly all caged peptides contain photocleavable groups positioned on the side chains of key residues. We describe an alternative active site targeted strategy that disrupts the interaction between the protein target (SH2 domain, kinase, and proteinase) and a critical amide NH moiety of the peptide probe.

Indexed as

Binding SitesCyclic AMP-Dependent Protein KinasesLightModels, MolecularMolecular StructureOligonucleotide ProbesPeptide HydrolasesPhosphorylationPhotochemistryProtein BindingSensitivity and Specificitysrc Homology DomainsStructure-Activity RelationshipTime FactorsCyclic AMP-Dependent Protein KinasesOligonucleotide ProbesPeptide Hydrolases

Identifiers

PMID17506572
PMCPMC3057037

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.