Evidence map›Paper›PMID 17505822›Full record

ArticleImmunogenetics2007

Chicken CD69 and CD94/NKG2-like genes in a chromosomal region syntenic to mammalian natural killer gene complex.

Hsin-I Chiang, Huaijun Zhou, Terje Raudsepp, Palmy R Jesudhasan, James J Zhu

Abstract readComparative StudyValidation Study
PubMed Publisher
In one paragraph

Article in Immunogenetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.3field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 42 citations in OpenAlex.

  1. Review
  2. The Interplay betweenPathogens (Basel, Switzerland) · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Hsin-I ChiangDepartment of Poultry Science, Texas A & M University, College Station, TX 77843, USA.
Huaijun Zhou
Terje Raudsepp
Palmy R Jesudhasan
James J Zhu
Texas A&M University · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In mammals, natural killer (NK) cell C-type lectin receptors were encoded in a gene cluster called natural killer gene complex (NKC). The NKC is not reported in chicken yet. Instead, NK receptor genes were found in the major histocompatibility complex. In this study, two novel chicken C-type lectin-like receptor genes were identified in a region on chromosome 1 that is syntenic to mammalian NKC region. The chromosomal locations were validated with fluorescent in situ hybridization. Based on 3D structure modeling, sequence homology, chromosomal location, and phylogenetic analysis, one receptor is the orthologue of mammalian cluster of differentiation 69 (CD69), and the other is highly homologous to CD94 and NKG2. Like CD94/NKG2 gene found in teleostean fishes, chicken CD94/NKG2 has the features of both human CD94 and NKG2A. Unlike mammalian NKC, these two chicken C-type lectin receptors are not closely linked but separated by 42 million base pairs according to the chicken draft genome sequence. The arrangement of several other genes that are located outside the mammalian NKC is conserved among chicken, human, and mouse. The chicken NK C-type lectin-like receptors in the NKC syntenic region indicate that this chromosomal region existed before the divergence between mammals and aves.

Indexed as

Amino Acid SequenceAnimalsAntigens, CDAntigens, Differentiation, T-LymphocyteCattleCD69 AntigensChickensChromosomal Proteins, Non-HistoneEvolution, MolecularHumansKiller Cells, NaturalLectins, C-TypeMiceMolecular Sequence DataNK Cell Lectin-Like Receptor Subfamily CNK Cell Lectin-Like Receptor Subfamily DAntigens, CDAntigens, Differentiation, T-LymphocyteCD69 AntigensChromosomal Proteins, Non-HistoneKLRC1 protein, humanKlrc1 protein, mouseLectins, C-TypeNK Cell Lectin-Like Receptor Subfamily CNK Cell Lectin-Like Receptor Subfamily DReceptors, ImmunologicReceptors, Natural Killer Cell

Identifiers

PMID17505822
OpenAlexW2027756598

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.