Evidence map›Paper›PMID 17496076›Full record

ArticleJournal of bacteriology2007

Histidine auxotrophy in commensal and disease-causing nontypeable Haemophilus influenzae.

Patricia C Juliao, Carl F Marrs, Jingping Xie, Janet R Gilsdorf

Open access · greenAbstract read
In one paragraph

Article in Journal of bacteriology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed, 1 synthesis or guideline pooled it, 32 citations in OpenAlex.

  1. Pooled it
  2. Role of Metabolic Adaptation ofPathogens (Basel, Switzerland) · 2023
    Review
  3. Article
  4. Learning from -omics strategies applied to uncoverComputational and structural biotechnology journal · 2021
    Review
  5. Article
  6. Metabolic and genetic basis for auxotrophies in Gram-negative species.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. Otitis media associated polymorphisms in the hemin receptor HemR of nontypeable Haemophilus influenzae.Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases · 2014
    Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Patricia C JuliaoDepartment of Epidemiology, University of Michigan School of Public Health, Ann Arbor, Michigan, USA.
Carl F Marrs
Jingping Xie
Janet R Gilsdorf
University of Michigan–Ann Arbor · US

Funding

H. influenzae Genes Associated with Acute Otitis MediaR01DC005840 · NIDCD · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI GILSDORF, JANET R · 2002 to 2010
$3.6M
NIDCD NIH HHS R01 DC005840NIDCD NIH HHS R01 DC05840
6 · The paper itself

Abstract

Histidine biosynthesis is one of the best studied metabolic pathways in bacteria. Although this pathway is thought to be highly conserved within and between bacterial species, a previous study identified a genetic region within the histidine operon (his) of nontypeable strains of Haemophilus influenzae (NTHI) that was more prevalent among otitis media strains than among throat commensal NTHI strains. In the present study, we further characterized this region and showed that genes in the complete his operon (hisG, -D, -C, -NB, -H, -A, -F, and -IE) are >99% conserved among four fully sequenced NTHI strains, are present in the same location in these four genomes, and are situated in the same gene order. Using PCR and dot blot hybridization, we determined that the his operon was significantly more prevalent in otitis media NTHI strains (106/121; 87.7%) than in throat strains (74/137; 54%) (prevalence ratio, 1.62; P<0.0001), suggesting a possible role in middle ear survival and/or acute otitis media. NTHI strains lacking the his operon showed attenuated growth in histidine-restricted media, confirming them as his-negative auxotrophs. Our results suggest that the ability to make histidine is an important factor in bacterial growth and survival in the middle ear, where nutrients such as histidine may be found in limited amounts. Those isolates lacking the histidine pathway were still able to survive well in the throat, which suggests that histidine is readily available in the throat environment.

Indexed as

OperonBacterial ProteinsDNA, BacterialEar, MiddleGene Expression Regulation, BacterialGene OrderGenes, BacterialHaemophilus InfectionsHaemophilus influenzaeHistidineHumansMicrobial ViabilityOtitis MediaPharynxPolymerase Chain ReactionSequence Analysis, DNABacterial ProteinsDNA, BacterialHistidine

Identifiers

PMID17496076
PMCPMC1951860
OpenAlexW2095929456

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.