Evidence map›Paper›PMID 17494733›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2007

Evidence for regulatory function of nucleus-encoded factors on mRNA stabilization and translation in the chloroplast.

Cécile Raynaud, Christelle Loiselay, Katia Wostrikoff, Richard Kuras, Jacqueline Girard-Bascou, Francis-André Wollman, Yves Choquet

Open access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 44 papers.

0numbers the graph read from it
0cells of the map it votes in
44citing papers in PubMed
3.2field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

44 citing papers in PubMed, 91 citations in OpenAlex.

  1. Article
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  3. The chloroplast ATP synthase redox domain inProceedings of the National Academy of Sciences of the United States of America · 2024
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  4. Review
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  8. High intraspecific diversity of Restorer-of-fertility-like genes in barley.The Plant journal : for cell and molecular biology · 2019
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  19. Molecular basis of fruit development.Frontiers in plant science · 2015
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Cécile RaynaudCentre National de la Recherche Scientifique/Université Pierre et Marie Curie, UMR 7141, Institut de Biologie Physico-Chimique, 13 Rue Pierre et Marie Curie, 75005 Paris, France.
Christelle Loiselay
Katia Wostrikoff
Richard Kuras
Jacqueline Girard-Bascou
Francis-André Wollman
Yves Choquet
Cornell University · USSorbonne Université · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A salient feature of organelle gene expression is the requirement for nucleus-encoded factors that act posttranscriptionally in a gene-specific manner. A central issue is to understand whether these factors are merely constitutive or have a regulatory function. In the unicellular alga Chlamydomonas reinhardtii, expression of the chloroplast petA gene-encoding cytochrome f, a major subunit of the cytochrome b(6)f complex, depends on two specific nucleus-encoded factors: MCA1, required for stable accumulation of the petA transcript, and TCA1, required for its translation. We cloned the TCA1 gene, encoding a pioneer protein, and transformed appropriate mutant strains with tagged versions of MCA1 and TCA1. In transformed strains expressing decreasing amounts of MCA1 or TCA1, the concentration of these factors proved limiting for petA mRNA accumulation and cytochrome f translation, respectively. This observation suggests that in exponentially growing cells, the abundance of MCA1 sets the pool of petA transcripts, some of which are TCA1-selected for an assembly-dependent translation of cytochrome f. We show that MCA1 is a short-lived protein. Its abundance varies rapidly with physiological conditions that deeply affect expression of the petA gene in vivo, for instance in aging cultures or upon changes in nitrogen availability. We observed similar but more limited changes in the abundance of TCA1. We conclude that in conditions where de novo biogenesis of cytochrome b(6)f complexes is not required, a rapid drop in MCA1 exhausts the pool of petA transcripts, and the progressive loss of TCA1 further prevents translation of cytochrome f.

Indexed as

Algal ProteinsAnimalsCell NucleusChlamydomonas reinhardtiiChloroplastsCytochromes fDown-RegulationGenetic VectorsMembrane ProteinsMolecular Sequence DataNitrogenProtein BiosynthesisRNA, MessengerRNA StabilitySensitivity and SpecificityAlgal ProteinsCytochromes fMembrane ProteinsNitrogenRNA, Messenger

Identifiers

PMID17494733
PMCPMC1885633
OpenAlexW2062418478

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.