Evidence map›Paper›PMID 17493577›Full record

ArticleArchives of biochemistry and biophysics2007

A novel function of VCP (valosin-containing protein; p97) in the control of N-glycosylation of proteins in the endoplasmic reticulum.

Agnieszka Lass, Elizabeth McConnell, Dominika Nowis, Yehia Mechref, Pilsoo Kang, Milos V Novotny, Cezary Wójcik

Open access · greenAbstract read
In one paragraph

Article in Archives of biochemistry and biophysics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.8field-weighted citation impact, top 31% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. AAA ATPase p97/VCP: cellular functions, disease and therapeutic potential.Journal of cellular and molecular medicine · 2008
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Agnieszka LassDepartment of Anatomy and Cell Biology, Indiana University School of Medicine-Evansville, Evansville, IN 47712, USA.
Elizabeth McConnell
Dominika Nowis
Yehia Mechref
Pilsoo Kang
Milos V Novotny
Cezary Wójcik
Indiana University Bloomington · USIndiana University School of MedicineIndiana University · US

Funding

TRAININGP41RR018942 · NCRR · TRUSTEES OF INDIANA UNIVERSITY · PI REILLY, JAMES P. · 2005 to 2008
$3.9M
NCRR NIH HHS P41 RR018942NCRR NIH HHS RR018942
6 · The paper itself

Abstract

alpha-Chain of T-cell receptor (TCR) is a typical ERAD (ER-associated degradation) substrate degraded in the absence of other TCR subunits. Depletion of derlin 1 fails to induce accumulation of alphaTCR despite inducing accumulation of alpha1-antitrypsin, another ERAD substrate. Furthermore, while depletion of VCP does not affect levels of alpha1-antitrypsin, it induces an increase in levels of alphaTCR. RNAi of VCP induces preferential accumulation of alphaTCR with less mannose residues, suggesting its retention within the ER. Mass spectrometric analysis of cellular N-linked glycans revealed that depletion of VCP decreases the level of high-mannose glycoproteins, increases the levels of truncated low-mannose glycoproteins and induces changes in the abundance of complex glycans assembled in post-ER compartments. Since proteasome inhibition was unable to mimic those changes, they cannot be regarded as a simple consequence of inhibited ERAD but represent a complex effect of VCP on the function of the ER.

Indexed as

Adenosine Triphosphatasesalpha 1-AntitrypsinCell Cycle ProteinsEndoplasmic ReticulumGlycoproteinsGlycosylationGreen Fluorescent ProteinsHeLa CellsHumansMannoseMembrane ProteinsModels, BiologicalProtein BiosynthesisProtein TransportRNA InterferenceUbiquitinAdenosine Triphosphatasesalpha 1-AntitrypsinCell Cycle ProteinsDERL1 protein, humanGlycoproteinsGreen Fluorescent ProteinsMannoseMembrane ProteinsUbiquitinValosin Containing ProteinVCP protein, human

Identifiers

PMID17493577
PMCPMC2040342
OpenAlexW2031750904

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.