Evidence map›Paper›PMID 17491626›Full record

ArticleJournal of the Optical Society of America. A, Optics, image science, and vision2007

AIDA: an adaptive image deconvolution algorithm with application to multi-frame and three-dimensional data.

Erik F Y Hom, Franck Marchis, Timothy K Lee, Sebastian Haase, David A Agard, John W Sedat

Abstract read
In one paragraph

Article in Journal of the Optical Society of America. A, Optics, image science, and vision, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Adaptive optics for optical microscopy [Invited].Biomedical optics express · 2023
    Review
  2. Article
  3. Review
  4. Review
  5. High-resolution restoration of 3D structures from widefield images with extreme low signal-to-noise-ratio.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Erik F Y HomGraduate Group in Biophysics and Department of Biochemistry and Biophysics, University of California, San Francisco 94143-2240, USA. erik@freshboom.com
Franck Marchis
Timothy K Lee
Sebastian Haase
David A Agard
John W Sedat

Funding

Microtubule Nucleation: Structure & MechanismR01GM031627 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI AGARD, DAVID A. · 1985 to 2016
$6.1M
Study of Diploid Interphase and Anaphase ChromosomesR01GM025101 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI SEDAT, JOHN W · 1985 to 2006
$4.1M
Howard Hughes Medical InstituteNIGMS NIH HHS GM25101-26NIGMS NIH HHS GM31627NIGMS NIH HHS R01 GM025101NIGMS NIH HHS R01 GM031627
6 · The paper itself

Abstract

We describe an adaptive image deconvolution algorithm (AIDA) for myopic deconvolution of multi-frame and three-dimensional data acquired through astronomical and microscopic imaging. AIDA is a reimplementation and extension of the MISTRAL method developed by Mugnier and co-workers and shown to yield object reconstructions with excellent edge preservation and photometric precision [J. Opt. Soc. Am. A21, 1841 (2004)]. Written in Numerical Python with calls to a robust constrained conjugate gradient method, AIDA has significantly improved run times over the original MISTRAL implementation. Included in AIDA is a scheme to automatically balance maximum-likelihood estimation and object regularization, which significantly decreases the amount of time and effort needed to generate satisfactory reconstructions. We validated AIDA using synthetic data spanning a broad range of signal-to-noise ratios and image types and demonstrated the algorithm to be effective for experimental data from adaptive optics-equipped telescope systems and wide-field microscopy.

Indexed as

AlgorithmsImage Interpretation, Computer-AssistedImaging, Three-DimensionalModels, TheoreticalAnimalsAnuraChromosomesDrosophilaMagnetic Resonance ImagingMicrotubulesMitosisPlanetsReproducibility of ResultsSchizosaccharomyces

Identifiers

PMID17491626
PMCPMC3166524

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.