Evidence map›Paper›PMID 17490704›Full record

ArticleVirology2007

Multimerization of the p12 domain is necessary for Mason-Pfizer monkey virus Gag assembly in vitro.

Zdenek Knejzlík, Zdena Smékalová, Tomás Ruml, Michael Sakalian

Open access · greenAbstract read
In one paragraph

Article in Virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.6field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Article
  3. Assembly and architecture of HIV.Advances in experimental medicine and biology · 2012
    Review
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 2 countries.

Zdenek KnejzlíkDepartment of Biochemistry and Microbiology and Center for Integrated Genomics, Institute of Chemical Technology, Prague 166 28, Czech Republic.
Zdena Smékalová
Tomás Ruml
Michael Sakalian
University of Chemistry and Technology, Prague · CZCzech Academy of Sciences, Institute of Organic Chemistry and Biochemistry · CZUniversity of Oklahoma Health Sciences Center · US

Funding

IN VITRO ASSEMBLY AND INHIBITION OF HIV CAPSIDSR01AI043230 · NIAID · UNIVERSITY OF OKLAHOMA HLTH SCIENCES CTR · PI SAKALIAN, MICHAEL · 1998 to 2001
$414k
NIAID NIH HHS AI43230NIAID NIH HHS R01 AI043230
6 · The paper itself

Abstract

Mason-Pfizer monkey virus (M-PMV) Gag protein contains a domain p12 that is unique to this virus (simian retrovirus-3) and its close relatives. The alpha-helical N-terminal half of p12, which contains a leucine zipper-like region, forms ordered structures in E. coli and the C-terminal half can form SDS-resistant oligomers in vitro. Together these properties suggest that p12 is a strong protein-protein interaction domain that facilitates Gag-Gag oligomerization. We have analyzed the oligomerization potential of a panel of p12 mutants, including versions containing substituted dimer, trimer, and tetramer leucine zippers, expressed in bacteria and in the context of the Gag precursor expressed in vitro and in cells. Purified recombinant p12 and its mutants could form various oligomers as shown by chemical cross-linking experiments. Within Gag these same mutants could assemble when overexpressed in cells. In contrast, all the mutants, including the leucine zipper mutants, were assembly defective in a cell-free system. These data highlight the importance of a region containing alternating leucines and isoleucines within p12, but also indicate that this domain's scaffold-like function is more complex than small number oligomerization.

Indexed as

AnimalsChlorocebus aethiopsCOS CellsGene Products, gagLeucine ZippersMason-Pfizer monkey virusMicroscopy, Electron, TransmissionMolecular Sequence DataMutationProtein BindingProtein Structure, TertiaryRecombinant ProteinsVirionGene Products, gagp12 protein, Mason-Pfizer monkey virusRecombinant Proteins

Identifiers

PMID17490704
PMCPMC2001283
OpenAlexW1993821686

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.