Evidence map›Paper›PMID 17482208›Full record

ArticleJournal of molecular biology2007

Structure of the FH2 domain of Daam1: implications for formin regulation of actin assembly.

Jun Lu, Wuyi Meng, Florence Poy, Sankar Maiti, Bruce L Goode, Michael J Eck

Open access · greenAbstract read
In one paragraph

Article in Journal of molecular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
3.1field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 105 citations in OpenAlex.

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  5. The dishevelled associated activator of morphogenesis protein 2 (Daam2) regulates neural tube closure.Developmental dynamics : an official publication of the American Association of Anatomists · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 1 country.

Jun LuDepartment of Biological Chemistry and Molecular Pharmacology, Harvard Medical School and Department of Cancer Biology, Dana-Farber Cancer Institute, 44 Binney Street, Boston, MA 02115, USA.
Wuyi Meng
Florence Poy
Sankar Maiti
Bruce L Goode
Michael J Eck
Brandeis University · USDana-Farber Cancer Institute · USHarvard University · US

Funding

Y-FAMILY POLYMERASES AND CO-FACTORS IN TRANSLESION REPLICATIONP41RR015301 · NCRR · CORNELL UNIVERSITY ITHACA · PI EISENBERG, DAVID · 2001 to 2011
$28.2M
Regulation of formins and cell polarity in yeastR01GM083137 · NIGMS · BRANDEIS UNIVERSITY · PI GOODE, BRUCE L · 2008 to 2019
$4.3M
Structural Biology of Formin ProteinsR01GM071834 · NIGMS · DANA-FARBER CANCER INSTITUTE · PI ECK, MICHAEL J · 2004 to 2013
$3.1M
Structural Biology of Formin ProteinsR56GM071834 · NIGMS · DANA-FARBER CANCER INST · PI ECK, MICHAEL J · 2009 to 2009
$483k
NCRR NIH HHS P41 RR015301NIGMS NIH HHS GM071834NIGMS NIH HHS R01 GM071834NIGMS NIH HHS R01 GM083137NIGMS NIH HHS R56 GM071834
6 · The paper itself

Abstract

Daam1 (dishevelled-associated activator of morphogenesis-1) is a diaphanous-related formin first studied as a novel dishevelled binding protein and shown to be crucial for the planar cell polarity (PCP) pathway in Xenopus. Daam1, like other formins, directs nucleation and elongation of new actin filaments using its conserved formin-homology-2 (FH2) domain. Here we report the crystal structure of a large C-terminal fragment of human Daam1 containing the FH2 domain. The structure, determined at 2.25 A resolution using the single-wavelength anomalous diffraction (SAD) phasing method, reveals a "tethered dimer" architecture that is similar to that previously described for the FH2 domain of the yeast formin Bni1, which shares approximately 21% sequence identity with Daam1. Despite the overall similarity with the dimeric FH2 domain of Bni1 and with a truncated monomeric structure of mDia1, the Daam1 FH2 structure reveals a number of differences in secondary structure elements and in the "lasso/post" dimerization interface that may be functionally important. Most strikingly, the two halves of the crystallographic dimer pack together in a manner that occludes their actin binding surfaces. This "locked" conformation is stabilized by two novel, interacting beta-strands formed by the ends of the linkers that connect the two sides of the dimer. The Daam1 FH2 domain has weak actin assembly activity as compared with other mammalian formins, but mutations that disrupt the beta-strand lock increase activity about tenfold to a level comparable to other formins, suggesting that this occluded conformation may represent an auto-inhibited conformation of the Daam1 FH2 domain.

Indexed as

ActinsAdaptor Proteins, Signal TransducingAmino Acid SequenceAnimalsBinding SitesCrystallography, X-RayDimerizationHumansMicrofilament ProteinsModels, MolecularMolecular Sequence DataMutationProtein ConformationProtein Structure, TertiaryRabbitsrho GTP-Binding ProteinsActinsAdaptor Proteins, Signal TransducingDAAM1 protein, humanDaam1 protein, mouseMicrofilament Proteinsrho GTP-Binding Proteins

Identifiers

PMID17482208
PMCPMC1939941
OpenAlexW2090682358

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.