Evidence map›Paper›PMID 17479345›Full record

ArticleJournal of molecular evolution2007

The mitochondrial subgenomes of the nematode Globodera pallida are mosaics: evidence of recombination in an animal mitochondrial genome.

Tracey Gibson, Vivian C Blok, Mark S Phillips, Gary Hong, Duminda Kumarasinghe, Ian T Riley, Mark Dowton

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Article in Journal of molecular evolution, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
4.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 50 citations in OpenAlex.

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  8. Evolution and inheritance of animal mitochondrial DNA: rules and exceptions.Journal of biological research (Thessalonike, Greece) · 2017
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Tracey GibsonInstitute of Biomolecular Sciences, School of Biology, University of Wollongong, Wollongong, NSW, Australia. tgibson@uow.edu.au
Vivian C Blok
Mark S Phillips
Gary Hong
Duminda Kumarasinghe
Ian T Riley
Mark Dowton
University of Wollongong · AUCrop Research Institute · CZSouth Australian Research and Development Institute · AU

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We sequenced four mitochondrial subgenomes from the potato cyst nematode Globodera pallida, previously characterized as one of the few animals to have a multipartite mitochondrial genome. The sequence data indicate that three of these subgenomic mitochondrial circles are mosaics, comprising long, multigenic fragments derived from fragments of the other circles. This pattern is consistent with the operation of intermitochondrial recombination, a process generally considered absent in animal mitochondria. We also report that many of the duplicated genes contain deleterious mutations, ones likely to render the gene nonfunctional; gene conversion does not appear to be homogenizing the different gene copies. The proposed nonfunctional copies are clustered on particular circles, whereas copies that are likely to code functional gene products are clustered on others.

Indexed as

MosaicismAmino Acid SequenceAnimalsDNA, CircularDNA, MitochondrialGene ConversionGene DuplicationGenes, HelminthGenome, HelminthHelminth ProteinsMolecular Sequence DataNematodaRecombination, GeneticSequence Homology, Nucleic AcidDNA, CircularDNA, MitochondrialHelminth Proteins

Identifiers

PMID17479345
OpenAlexW2054065154

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.