Evidence map›Paper›PMID 17476268›Full record

ArticleGenes and immunity2007

Genetic linkage analysis of sarcoidosis phenotypes: the sarcoidosis genetic analysis (SAGA) study.

B A Rybicki, R Sinha, S Iyengar, C Gray-McGuire, R C Elston, M C Iannuzzi, SAGA Study Consortium

Abstract read
PubMed Publisher
In one paragraph

Article in Genes and immunity, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 65 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Article
  5. Article
  6. Genetics of neurosarcoidosis.Journal of neuroimmunology · 2022
    Review
  7. Article
  8. Article
  9. Article
  10. Review
  11. [Artificial intelligence empowers laboratory medicine in Industry 4.0].Nan fang yi ke da xue xue bao = Journal of Southern Medical University · 2020
    Review
  12. Article
  13. Article
  14. Article
  15. [Sarcoidosis : Renal manifestations].Zeitschrift fur Rheumatologie · 2017
    Review
  16. Review
  17. Fine mapping of chromosome 15q25 implicates ZNF592 in neurosarcoidosis patients.Annals of clinical and translational neurology · 2015
    Article
  18. Article
  19. Article
  20. Neuro-ophthalmic sarcoidosis.Eye and brain · 2012
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

B A RybickiDepartment of Biostatistics and Research Epidemiology, Henry Ford Health System, Detroit, MI 48202, USA. brybick1@hfhs.org
R Sinha
S Iyengar
C Gray-McGuire
R C Elston
M C Iannuzzi
SAGA Study Consortium
Case Western Reserve University · USHenry Ford Health System · USIcahn School of Medicine at Mount Sinai · US

Funding

X-LINKED EXTENSION OF THE REVISED HASEMAN-ELSTON ALGORITHM FOR LINKAGE ANALYSISP41RR003655 · NCRR · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI ELSTON, ROBERT C. · 1987 to 2011
$11.5M
SARCOIDOSIS GENETIC LINKAGE CONSORTIUMU01HL060263 · NHLBI · HENRY FORD HEALTH SYSTEM · PI IANNUZZI, MICHAEL C · 1999 to 2003
$6.5M
GENETIC ANALYSIS OF MULTIFACTORIAL TRAITSR37GM028356 · NIGMS · CASE WESTERN RESERVE UNIVERSITY · PI ELSTON, ROBERT C. · 1998 to 2007
$2.9M
GENETIC ANALYSIS OF MULTIFACTORIAL TRAITSR01GM028356 · NIGMS · LOUISIANA STATE UNIV HSC NEW ORLEANS · PI ELSTON, ROBERT C. · 1985 to 1997
–
NCRR NIH HHS P41 RR003655NHLBI NIH HHS U01 HL060263NIGMS NIH HHS GM28356
6 · The paper itself

Abstract

The sarcoidosis genetic analysis (SAGA) study previously identified eight chromosomal regions with suggestive evidence for linkage to sarcoidosis susceptibility in African-American sib pairs. Since the clinical course of sarcoidosis is variable and likely under genetic control, we used the affected relative pair portion of the SAGA sample (n=344 pairs) to perform multipoint linkage analyses with covariates based on pulmonary and organ involvement phenotypes. Chest radiographic resolution was the pulmonary phenotype with the highest LOD (logarithm of the backward odds, or likelihood ratio) score of 5.11 at D1S3720 on chromosome 1p36 (P=4 x 10(-5)). In general, higher LOD scores were attained for covariates that modeled clustered organ system involvement rather than individual organ systems, with the cardiac/renal group having the highest LOD score of 6.65 at chromosome 18q22 (P=2 x 10(-5)). The highest LOD scores for the other three organ involvement groups of liver/spleen/bone marrow, neuro/lymph and ocular/skin/joint were 3.72 at 10p11 (P=0.0004), 5.16 at 7p22 (P=4 x 10(-5)) and 2.93 at 10q26 (P=0.001), respectively. Most of the phenotype linkages did not overlap with the regions previously found linked to susceptibility. Our results suggest that genes influencing clinical presentation of sarcoidosis in African Americans are likely to be different from those that underlie disease susceptibility.

Indexed as

Genetic Predisposition to DiseaseAdultBlack or African AmericanFemaleGenetic TestingGenotypeHumansLod ScoreMaleMiddle AgedPedigreePhenotypeSarcoidosisSiblings

Identifiers

PMID17476268
OpenAlexW1986109078

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.