Evidence map›Paper›PMID 17475909›Full record

Trial reportBlood2007

The human Shwachman-Diamond syndrome protein, SBDS, associates with ribosomal RNA.

Karthik A Ganapathi, Karyn M Austin, Chung-Sheng Lee, Anusha Dias, Maggie M Malsch, Robin Reed, Akiko Shimamura

Open access · bronzeAbstract readClinical Trial
In one paragraph

Trial report in Blood, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed
8.2field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 156 citations in OpenAlex.

  1. Genetic influences on haematopoiesis.Nature reviews. Genetics · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Ribosome biogenesis in disease: new players and therapeutic targets.Signal transduction and targeted therapy · 2023
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Karthik A GanapathiDepartment of Pediatric Hematology, Children's Hospital Boston, Boston, MA, USA.
Karyn M Austin
Chung-Sheng Lee
Anusha Dias
Maggie M Malsch
Robin Reed
Akiko Shimamura
Harvard University · USBoston Children's Hospital · US

Funding

Shwachman-Diamond Syndrome: Molecular PathogenesisR01HL079582 · NHLBI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI SHIMAMURA, AKIKO · 2004 to 2012
$3.7M
Clinical Applications of a Novel Fanconi Anemia AssayK23HL068632 · NHLBI · DANA-FARBER CANCER INSTITUTE · PI SHIMAMURA, AKIKO · 2002 to 2007
$652k
NHLBI NIH HHS K23 HL068632NHLBI NIH HHS K23 HL068632-03NHLBI NIH HHS R01 HL079582NHLBI NIH HHS R01 HL079582-02
6 · The paper itself

Abstract

Shwachman-Diamond syndrome (SDS) is an autosomal recessive disorder characterized by bone marrow failure, exocrine pancreatic dysfunction, and leukemia predisposition. Mutations in the SBDS gene are identified in most patients with SDS. SBDS encodes a highly conserved protein of unknown function. Data from SBDS orthologs suggest that SBDS may play a role in ribosome biogenesis or RNA processing. Human SBDS is enriched in the nucleolus, the major cellular site of ribosome biogenesis. Here we report that SBDS nucleolar localization is dependent on active rRNA transcription. Cells from patients with SDS or Diamond-Blackfan anemia are hypersensitive to low doses of actinomycin D, an inhibitor of rRNA transcription. The addition of wild-type SBDS complements the actinomycin D hypersensitivity of SDS patient cells. SBDS migrates together with the 60S large ribosomal subunit in sucrose gradients and coprecipitates with 28S ribosomal RNA (rRNA). Loss of SBDS is not associated with a discrete block in rRNA maturation or with decreased levels of the 60S ribosomal subunit. SBDS forms a protein complex with nucleophosmin, a multifunctional protein implicated in ribosome biogenesis and leukemogenesis. Our studies support the addition of SDS to the growing list of human bone marrow failure syndromes involving the ribosome.

Indexed as

Bone Marrow DiseasesCell NucleusCells, CulturedDactinomycinGenetic Diseases, InbornGenetic Predisposition to DiseaseHumansLeukemiaMultiprotein ComplexesNuclear ProteinsNucleic Acid Synthesis InhibitorsNucleophosminPancreatic DiseasesProtein BindingProteinsRibosomesDactinomycinMultiprotein ComplexesNPM1 protein, humanNuclear ProteinsNucleic Acid Synthesis InhibitorsNucleophosminProteinsRNA, RibosomalSBDS protein, human

Identifiers

PMID17475909
PMCPMC1975835
OpenAlexW1982494994

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.