Evidence map›Paper›PMID 17475654›Full record

ArticleJournal of virology2007

Ultracentrifugation of serum samples allows detection of hepatitis C virus RNA in patients with occult hepatitis C.

Javier Bartolomé, Juan Manuel López-Alcorocho, Inmaculada Castillo, Elena Rodríguez-Iñigo, Juan Antonio Quiroga, Ricardo Palacios, Vicente Carreño

Open access · greenAbstract read
In one paragraph

Article in Journal of virology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 103 citations in OpenAlex.

  1. Trial
  2. Trial
  3. Article
  4. Article
  5. Article
  6. Article
  7. Occult Hepatitis C Virus Infection: A Review.Journal of clinical and translational hepatology · 2018
    Review
  8. Article
  9. Occult HCV Infection: The Current State of Knowledge.Iranian Red Crescent medical journal · 2015
    Review
  10. Article
  11. A New Twist to a Chronic HCV Infection: Occult Hepatitis C.Gastroenterology research and practice · 2015
    Review
  12. Article
  13. Hepatitis C virus infection in nephrology patients.Journal of nephropathology · 2013
    Review
  14. Article
  15. Article
  16. New perspectives in occult hepatitis C virus infection.World journal of gastroenterology · 2012
    Article
  17. Article
  18. Clinical variables identify seronegative HCV co-infection in HIV-infected individuals.Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology · 2011
    Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Javier BartoloméFundación Estudio Hepatitis Virales, Madrid, Spain.
Juan Manuel López-Alcorocho
Inmaculada Castillo
Elena Rodríguez-Iñigo
Juan Antonio Quiroga
Ricardo Palacios
Vicente Carreño
Fundación para el Estudio de las Hepatitis Virales · ESDiater (Spain) · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Occult hepatitis C virus (HCV) infection of patients with abnormal liver function tests of unknown origin who are anti-HCV and serum HCV RNA negative but who have HCV RNA in the liver has been described. As HCV replicates in the liver cells of these patients, it could be that the amount of circulating viral particles is under the detection limit of the most sensitive techniques. To prove this hypothesis, serum samples from 106 patients with occult HCV infection were analyzed. Two milliliters of serum was ultracentrifuged over a 10% sucrose cushion for 17 h at 100,000 x g(av), where av means average, and HCV RNA detection was performed by strand-specific real-time PCR. Out of the 106 patients, 62 (58.5%) had detectable serum HCV RNA levels after ultracentrifugation, with a median load of 70.5 copies/ml (range, 18 to 192). Iodixanol density gradient studies revealed that HCV RNA was positive at densities of 1.03 to 1.04 and from 1.08 to 1.19 g/ml, which were very similar to those found in the sera of patients with classical chronic HCV infection. Antigenomic HCV RNA was found in the livers of 56 of 62 (90.3%) patients with detectable serum HCV RNA levels after ultracentrifugation, compared to 27 of 44 (61.4%) negative patients (P < 0.001). No differences in the median loads of antigenomic HCV RNA between patients with an those without serum HCV RNA (4.5 x 10(4) [range, 7.9 x 10(2) to 1.0 x 10(6)] versus 2.3 x 10(4) [range, 4.0 x 10(2) to 2.2 x 10(5)]) were found. Alanine aminotransferase and gamma-glutamyl transpeptidase levels, liver necroinflammatory activity, and fibrosis did not differ between both groups. In conclusion, HCV RNA can be detected in the sera of patients with occult HCV infection after circulating viral particles are concentrated by ultracentrifugation.

Indexed as

Base SequenceDNA PrimersFemaleHepacivirusHepatitis CHumansIn Situ HybridizationMalePhylogenyReverse Transcriptase Polymerase Chain ReactionRNA, ViralUltracentrifugationDNA PrimersRNA, Viral

Identifiers

PMID17475654
PMCPMC1933375
OpenAlexW2102072461

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.