Evidence map›Paper›PMID 17470285›Full record

ArticleBMC developmental biology2007

Rybp, a polycomb complex-associated protein, is required for mouse eye development.

Melinda K Pirity, Wei-Lin Wang, Louise V Wolf, Ernst R Tamm, Nicole Schreiber-Agus, Ales Cvekl

Open access · hybridAbstract read
In one paragraph

Article in BMC developmental biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 1 synthesis or guideline pooled it, 34 citations in OpenAlex.

  1. Pooled it
  2. De novo variants in RYBP are associated with a severe neurodevelopmental disorder and congenital anomalies.Genetics in medicine : official journal of the American College of Medical Genetics · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Epigenetic regulation of retinal development.Epigenetics & chromatin · 2021
    Review
  8. Article
  9. Article
  10. Review
  11. Multiple roles of Ring 1 and YY1 binding protein in physiology and disease.Journal of cellular and molecular medicine · 2018
    Review
  12. Review
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 2 countries.

Melinda K PirityDepartment of Molecular Genetics, Albert Einstein College of Medicine, Bronx, NY 10461, USA. mpirity@gmail.com <mpirity@gmail.com>
Wei-Lin Wang
Louise V Wolf
Ernst R Tamm
Nicole Schreiber-Agus
Ales Cvekl
Albert Einstein College of Medicine · USUniversity of Regensburg · DE

Funding

PAX-6 AS A KEY REGULATOR OF LENS DEVELOPMENTR01EY012200 · NEI · YESHIVA UNIVERSITY · PI CVEKL, ALES · 2000 to 2025
$13.1M
Transcriptional Control of the Mouse aA-crystallin locusR01EY014237 · NEI · YESHIVA UNIVERSITY · PI Ales Cvekl · 2003 to 2026
$11.0M
Transcriptional Repression by the Myc Antagonist MxilR01CA092558 · NCI · YESHIVA UNIVERSITY · PI SCHREIBER-AGUS, NICOLE · 2002 to 2006
$1.5M
Transcriptional Repression by the Myc Antagonist MxilR55CA092558 · NCI · YESHIVA UNIVERSITY · PI SCHREIBER-AGUS, NICOLE · 2001 to 2001
$100k
NCI NIH HHS CA92558NCI NIH HHS R01 CA092558NCI NIH HHS R55 CA092558NEI NIH HHS EY12200NEI NIH HHS R01 EY012200NEI NIH HHS R01 EY014237
6 · The paper itself

Abstract

backgroundRybp (Ring1 and YY1 binding protein) is a zinc finger protein which interacts with the members of the mammalian polycomb complexes. Previously we have shown that Rybp is critical for early embryogenesis and that haploinsufficiency of Rybp in a subset of embryos causes failure of neural tube closure. Here we investigated the requirement for Rybp in ocular development using four in vivo mouse models which resulted in either the ablation or overexpression of Rybp.

resultsOur results demonstrate that loss of a single Rybp allele in conventional knockout mice often resulted in retinal coloboma, an incomplete closure of the optic fissure, characterized by perturbed localization of Pax6 but not of Pax2. In addition, about one half of Rybp-/- <-> Rybp+/+ chimeric embryos also developed retinal colobomas and malformed lenses. Tissue-specific transgenic overexpression of Rybp in the lens resulted in abnormal fiber cell differentiation and severe lens opacification with increased levels of AP-2alpha and Sox2, and reduced levels of betaA4-crystallin gene expression. Ubiquitous transgenic overexpression of Rybp in the entire eye caused abnormal retinal folds, corneal neovascularization, and lens opacification. Additional changes included defects in anterior eye development.

conclusionThese studies establish Rybp as a novel gene that has been associated with coloboma. Other genes linked to coloboma encode various classes of transcription factors such as BCOR, CBP, Chx10, Pax2, Pax6, Six3, Ski, Vax1 and Vax2. We propose that the multiple functions for Rybp in regulating mouse retinal and lens development are mediated by genetic, epigenetic and physical interactions between these genes and proteins.

Indexed as

Gene Expression Regulation, DevelopmentalAnimalsBlotting, WesternColobomaCorneaEmbryo, MammalianEyeFemaleLens, CrystallineMiceMice, Inbred C57BLMice, KnockoutMicroscopy, ElectronPregnancyRepressor ProteinsRetinaRepressor ProteinsRybp protein, mouse

Identifiers

PMID17470285
PMCPMC1877082
OpenAlexW2053655929

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.