Evidence map›Paper›PMID 17469798›Full record

ArticleBiochemistry2007

Histidine 282 in 5-aminolevulinate synthase affects substrate binding and catalysis.

Tracy D Turbeville, Junshun Zhang, Gregory A Hunter, Gloria C Ferreira

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 17 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Tracy D TurbevilleDepartment of Molecular Medicine, College of Medicine, University of South Florida, Tampa, Florida 33612, USA.
Junshun Zhang
Gregory A Hunter
Gloria C Ferreira
Moffitt Cancer Center · USUniversity of South Florida · US

Funding

5-Aminolevulinate Synthase and Heme BiosynthesisR01DK063191 · NIDDK · UNIVERSITY OF SOUTH FLORIDA · PI FERREIRA, GLORIA C · 2004 to 2006
$600k
NIDDK NIH HHS DK63191NIDDK NIH HHS R01 DK063191
6 · The paper itself

Abstract

5-Aminolevulinate synthase (ALAS), the first enzyme of the heme biosynthetic pathway in mammalian cells, is a member of the alpha-oxoamine synthase family of pyridoxal 5'-phosphate (PLP)-dependent enzymes. In all structures of the enzymes of the -oxoamine synthase family, a conserved histidine hydrogen bonds with the phenolic oxygen of the PLP cofactor and may be significant for substrate binding, PLP positioning, and maintenance of the pKa of the imine nitrogen. In ALAS, replacing the equivalent histidine, H282, with alanine reduces the catalytic efficiency for glycine 450-fold and decreases the slow phase rate for glycine binding by 85%. The distribution of the absorbing 420 and 330 nm species was altered with an A420/A330 ratio increased from 0.45 to 1.05. This shift in species distribution was mirrored in the cofactor fluorescence and 300-500 nm circular dichroic spectra and likely reflects variation in the tautomer distribution of the holoenzyme. The 300-500 nm circular dichroism spectra of ALAS and H282A diverged in the presence of either glycine or aminolevulinate, indicating that the reorientation of the PLP cofactor upon external aldimine formation is impeded in H282A. Alterations were also observed in the K(Gly)d value and spectroscopic and kinetic properties, while the K(PLP)d increased 9-fold. Altogether, the results imply that H282 coordinates the movement of the pyridine ring with the reorganization of the active site hydrogen bond network and acts as a hydrogen bond donor to the phenolic oxygen to maintain the protonated Schiff base and enhance the electron sink function of the PLP cofactor.

Indexed as

5-Aminolevulinate SynthetaseAlanineAnimalsCatalysisCrystallography, X-RayGlycineHistidineKineticsMiceMutagenesis, Site-DirectedProtein BindingPyridoxal PhosphateRhodobacter capsulatusSpectrophotometrySubstrate Specificity5-Aminolevulinate SynthetaseAlanineGlycineHistidinePyridoxal Phosphate

Identifiers

PMID17469798
PMCPMC2566939
OpenAlexW2023479191

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.