Evidence map›Paper›PMID 17468296›Full record

ArticleJournal of medical genetics2007

Genotype phenotype correlation of 30 patients with Smith-Magenis syndrome (SMS) using comparative genome hybridisation array: cleft palate in SMS is associated with larger deletions.

J Andrieux, C Villenet, S Quief, S Lignon, S Geffroy, C Roumier, H de Leersnyder, M-C de Blois, S Manouvrier, B Delobel and 7 more

Open access · bronzeAbstract readLetter
In one paragraph

Article in Journal of medical genetics, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 25 citations in OpenAlex.

  1. A Case of Smith-Magenis Syndrome Undergoing Palatoplasty.Journal of plastic and reconstructive surgery · 2026
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 8 institutions in 1 country.

J Andrieux
C Villenet
S Quief
S Lignon
S Geffroy
C Roumier
H de Leersnyder
M-C de Blois
S Manouvrier
B Delobel
B Benzacken
P Bitoun
T Attie-Bitach
S Thomas
S Lyonnet
M Vekemans
J-P Kerckaert
Université de Lille · FRHôpital Necker-Enfants Malades · FRHôpital Jeanne de Flandre · FRInserm · FRAssistance Publique – Hôpitaux de Paris · FRHôpital Jean-Verdier · FRInstitut de Génomique Fonctionnelle · FRUniversité Catholique de Lille · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundSmith-Magenis syndrome (SMS) is rare (prevalence 1 in 25 000) and is associated with psychomotor delay, a particular behavioural pattern and congenital anomalies. SMS is often due to a chromosomal deletion of <4 Mb at the 17p11.2 locus, leading to haploinsufficiency of numerous genes. Mutations of one of these gemes, RAI1, seems to be responsible for the main features found with heterozygous 17p11.2 deletions.

methodsWe studied DNA from 30 patients with SMS using a 300 bp amplimers comparative genome hybridisation array encompassing 75 loci from a 22 Mb section from the short arm of chromosome 17.

resultsThree patients had large deletions (10%). Genotype-phenotype correlation showed that two of them had cleft palate, which was not found in any of the other patients with SMS (p<0.007, Fisher's exact test). The smallest extra-deleted region associated with cleft palate in SMS is 1.4 Mb, contains <16 genes and is located at 17p11.2-17p12. Gene expression array data showed that the ubiquitin B precursor (UBB) is significantly expressed in the first branchial arch in the fourth and fifth weeks of human development.

conclusionThese data support UBB as a good candidate gene for isolated cleft palate.

Indexed as

Chromosomes, Human, Pair 17Nucleic Acid HybridizationChromosome MappingCleft PalateCongenital AbnormalitiesGenotypeHumansIntellectual DisabilityMental DisordersOligonucleotide Array Sequence AnalysisPhenotypeSequence DeletionTrans-ActivatorsTranscription FactorsRAI1 protein, humanTrans-ActivatorsTranscription Factors

Identifiers

PMID17468296
PMCPMC2597929
OpenAlexW2273120788

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.