Evidence map›Paper›PMID 17466624›Full record

ArticleMolecular cell2007

Transcription elongation by RNA polymerase I is linked to efficient rRNA processing and ribosome assembly.

David A Schneider, Antje Michel, Martha L Sikes, Loan Vu, Jonathan A Dodd, Shilpa Salgia, Yvonne N Osheim, Ann L Beyer, Masayasu Nomura

Open access · greenAbstract read
In one paragraph

Article in Molecular cell, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 84 papers.

0numbers the graph read from it
0cells of the map it votes in
84citing papers in PubMed
5.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

84 citing papers in PubMed, 151 citations in OpenAlex.

  1. Article
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  7. Article
  8. Article
  9. RNA Polymerases I and III in development and disease.Seminars in cell & developmental biology · 2023
    Review
  10. Under the magnifying glass: The ups and downs of rDNA copy number.Seminars in cell & developmental biology · 2023
    Review
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Review
  20. Article

24 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

David A SchneiderDepartment of Biological Chemistry, University of California, Irvine, 240-D Medical Sciences I, Irvine, CA 92697-1700, USA.
Antje Michel
Martha L Sikes
Loan Vu
Jonathan A Dodd
Shilpa Salgia
Yvonne N Osheim
Ann L Beyer
Masayasu Nomura
University of California, Irvine · USUniversity of Virginia Health System · US

Funding

GENETICS AND BIOCHEMISTRY OF RIBOSOME SYNTHESISR01GM035949 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI NOMURA, MASAYASU · 1985 to 2009
$7.3M
Visualizing Genetic Activity in Normal & Mutant YeastR01GM063952 · NIGMS · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI BEYER, ANN L. · 2001 to 2013
$3.7M
GENETICS AND BIOCHEMISTRY OF RIBOSOME SYNTHESISR37GM035949 · NIGMS · UNIVERSITY OF CALIFORNIA IRVINE · PI NOMURA, MASAYASU · 1988 to 1997
–
NIGMS NIH HHS GM-35949NIGMS NIH HHS GM-63952NIGMS NIH HHS R01 GM035949NIGMS NIH HHS R01 GM063952
6 · The paper itself

Abstract

The synthesis of ribosomes in eukaryotic cells is a complex process involving many nonribosomal protein factors and snoRNAs. In general, the processes of rRNA transcription and ribosome assembly are treated as temporally or spatially distinct. Here, we describe the identification of a point mutation in the second largest subunit of RNA polymerase I near the active center of the enzyme that results in an elongation-defective enzyme in the yeast Saccharomyces cerevisiae. In vivo, this mutant shows significant defects in rRNA processing and ribosome assembly. Taken together, these data suggest that transcription of rRNA by RNA polymerase I is linked to rRNA processing and maturation. Thus, RNA polymerase I, elongation factors, and rRNA sequence elements appear to function together to optimize transcription elongation, coordinating cotranscriptional interactions of many factors/snoRNAs with pre-rRNA for correct rRNA processing and ribosome assembly.

Indexed as

Genes, FungalPoint MutationProtein SubunitsRibosomesRNA, FungalRNA Polymerase IRNA Processing, Post-TranscriptionalRNA, RibosomalSaccharomyces cerevisiaeTranscription, GeneticProtein SubunitsRNA, FungalRNA Polymerase IRNA, Ribosomal

Identifiers

PMID17466624
PMCPMC1927085
OpenAlexW2043097476

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.