Evidence map›Paper›PMID 17465505›Full record

ArticleWorld journal of gastroenterology2007

Gene expression analysis of pancreatic cystic neoplasm in SV40Tag transgenic mice model.

Jie Feng, Qiang Sun, Cheng Gao, Juan Dong, Xiao-Luan Wei, Hua Xing, Hou-Da Li

Abstract read
In one paragraph

Article in World journal of gastroenterology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
0.1field-weighted citation impact, top 46% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 4 citations in OpenAlex.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Jie FengShanghai Institute of Brain Functional Genomics, East China Normal University, Shanghai 200062, China.
Qiang Sun
Cheng Gao
Juan Dong
Xiao-Luan Wei
Hua Xing
Hou-Da Li
East China Normal University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

aimTo study the gene expression changes in pancreatic cystic neoplasm in SV40Tag transgenic mice model and to provide information about the prevention, clinical diagnosis and therapy of pancreatic cancer.

methodsUsing the pBC-SV40Tag transgenic mice model of pancreatic cystic neoplasm, we studied the gene expression changes by applying high-density microarrays. Validation of part gene expression profiling data was performed using real-time PCR.

resultsBy using high-density oligonucleotide microarray, of 14113 genes, 453 were increased and 760 decreased in pancreatic cystic neoplasm, including oncogenes, cell-cycle-related genes, signal transduction-related genes, skeleton-related genes and metabolism-related genes. Among these, we confirmed the changes in Igf, Shh and Wnt signal pathways with real-time PCR. The results of real-time PCR showed similar expression changes in gene chip.

conclusionall the altered expression genes are associated with cell cycle, DNA damage and repair, signal pathway, and metabolism. SV40Tag may cooperate with several proteins in promoting tumorigenesis.

Indexed as

Gene Expression ProfilingAnimalsAntigens, Polyomavirus TransformingCell Transformation, NeoplasticCystadenocarcinomaCystadenomaDisease Models, AnimalGene Expression Regulation, NeoplasticHedgehog ProteinsMiceMice, TransgenicOligonucleotide Array Sequence AnalysisPancreatic NeoplasmsPolymerase Chain ReactionSignal TransductionWnt ProteinsAntigens, Polyomavirus TransformingHedgehog ProteinsShh protein, mouseWnt Proteins

Identifiers

PMID17465505
PMCPMC4146848
OpenAlexW2098808367

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.