Evidence map›Paper›PMID 17459614›Full record

ArticleGene2007

Conserved function of caspase-8 in apoptosis during bony fish evolution.

Shin-ichi Sakata, Yilin Yan, Yutaka Satou, Akihiro Momoi, Phuong Ngo-Hazelett, Masami Nozaki, Makoto Furutani-Seiki, John H Postlethwait, Shin Yonehara, Kazuhiro Sakamaki

Open access · greenAbstract read
In one paragraph

Article in Gene, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 59 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. Article
  5. FLIP(L): the pseudo-caspase.The FEBS journal · 2020
    Review
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Review
  13. Article
  14. Review
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 2 countries.

Shin-ichi SakataDepartment of Animal Development and Physiology, Graduate School of Biostudies, Kyoto University, Kyoto 606-8501, Japan.
Yilin Yan
Yutaka Satou
Akihiro Momoi
Phuong Ngo-Hazelett
Masami Nozaki
Makoto Furutani-Seiki
John H Postlethwait
Shin Yonehara
Kazuhiro Sakamaki
Kyoto University · JPUniversity of Oregon · USOsaka University · JP

Funding

Zebrafish FacilityP01HD022486 · NICHD · UNIVERSITY OF OREGON · PI EISEN, JUDITH S · 1987 to 2017
$28.8M
GENOMIC ANALYSIS OF ZEBRAFISH DEVELOPMENTR01RR010715 · NCRR · UNIVERSITY OF OREGON · PI POSTLETHWAIT, JOHN HARVEY · 1995 to 2006
$3.1M
NCRR NIH HHS R01 RR010715NCRR NIH HHS R01 RR 10715NICHD NIH HHS 9P01 HD 22486NICHD NIH HHS P01 HD022486
6 · The paper itself

Abstract

Caspase-8, a member of the caspase family, plays an important role in apoptotic signal transduction in mammals. Here we report the identification and characterization of the caspase-8 (casp8) gene in the zebrafish Danio rerio. The zebrafish casp8 gene has a genomic organization similar to mammalian casp8 genes, consisting of 10 exons. By chromosome mapping, we found that casp8 maps on linkage group 6 (LG6), a zebrafish chromosome segment orthologous to the long arm of human Chr. 2, which carries CASP8. In contrast, the zebrafish casp10-like gene and the cflar gene separately localize on LG9 and LG11, respectively, and these genes form a cluster with CASP8 on the human chromosome. This chromosomal segregation is unique to fish but not other vertebrates. Furthermore, we examined the function of zebrafish Casp8 protein in mammalian cells, and showed that it has pro-apoptotic activity when overexpressed. In addition, this molecule was capable of transmitting apoptotic signals mediated through not only Fas but also the TNF receptor in mouse Casp8-deficient cells. Expression analysis showed that casp8 is maternally expressed, and transcripts continue to be present throughout embryogenesis and into larval stages. These results show that zebrafish casp8 has a structure and function similar to mammalian CASP8 orthologs, and our study suggests that the role of caspase-8 in the apoptotic signal pathway has been conserved over at least 450 million years of vertebrate evolution.

Indexed as

ApoptosisBiological EvolutionAmino Acid SequenceAnimalsApoptosis Regulatory ProteinsCaspase 8Embryonic DevelopmentGene Expression ProfilingGene Expression Regulation, DevelopmentalGenomeHeLa CellsHumansMiceMolecular Sequence DataPhylogenyPhysical Chromosome MappingApoptosis Regulatory ProteinsCaspase 8RNA, Messenger

Identifiers

PMID17459614
PMCPMC2064871
OpenAlexW1964226673

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.