Evidence map›Paper›PMID 17452447›Full record

ArticleMolecular and cellular biology2007

Yra1 is required for S phase entry and affects Dia2 binding to replication origins.

Swarna Swaminathan, Andrew C Kile, Elizabeth M MacDonald, Deanna M Koepp

Open access · greenAbstract read
In one paragraph

Article in Molecular and cellular biology, 2007. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.9field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 25 citations in OpenAlex.

  1. Article
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  7. RNA processing and export.Cold Spring Harbor perspectives in biology · 2010
    Review
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  14. Akt phosphorylation and nuclear phosphoinositide association mediate mRNA export and cell proliferation activities by ALY.Proceedings of the National Academy of Sciences of the United States of America · 2008
    Article
  15. Article
  16. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

Swarna SwaminathanDepartment of Genetics, Cell Biology and Development, University of Minnesota, 6-160 Jackson Hall, 321 Church St. SE, Minneapolis, MN 55455, USA.
Andrew C Kile
Elizabeth M MacDonald
Deanna M Koepp
University of Minnesota · US

Funding

The Role of the F-box Protein Dia2 in Cell Cycle ControlR01GM076663 · NIGMS · UNIVERSITY OF MINNESOTA · PI KOEPP, DEANNA M. · 2007 to 2011
$1.3M
NIGMS NIH HHS R01 GM076663
6 · The paper itself

Abstract

The Saccharomyces cerevisiae F-box protein Dia2 is important for DNA replication and genomic stability. Using an affinity approach, we identified Yra1, a transcription-coupled mRNA export protein, as a Dia2 interaction partner. We find that yra1 mutants are sensitive to DIA2 expression levels. Like Dia2, Yra1 associates with chromatin and binds replication origins, suggesting that they may function together in DNA replication. Consistent with this idea, Yra1 and Dia2 coimmunoprecipitate with Hys2, a subunit of DNA polymerase delta. The C terminus of Yra1 is required to interact with Dia2. A yra1 mutant that lacks this domain is temperature sensitive yet has no apparent defect in RNA export. Remarkably, this mutant also fails to enter S phase at the nonpermissive temperature. Significantly, other mutants in transcription-coupled export do not exhibit S phase entry defects or sensitivity to DIA2 expression levels. Together, these results indicate that Yra1 has a role in DNA replication distinct from its role in mRNA export. Furthermore, Dia2 binding to replication origins is significantly reduced when association with Yra1 is compromised, suggesting that one aspect of the role of Yra1 in DNA replication may involve recruiting Dia2 to chromatin.

Indexed as

Replication OriginS PhaseCell Cycle ProteinsChromatinDNA-Directed DNA PolymeraseDNA Polymerase IIIDNA ReplicationF-Box ProteinsMutationNuclear ProteinsProtein BindingRNA-Binding ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsCell Cycle ProteinsChromatinDia2 protein, S cerevisiaeDNA-Directed DNA PolymeraseDNA Polymerase IIIF-Box ProteinsNuclear ProteinsPOL31 protein, S cerevisiaeRNA-Binding ProteinsSaccharomyces cerevisiae ProteinsYRA1 protein, S cerevisiae

Identifiers

PMID17452447
PMCPMC1951488
OpenAlexW2075571819

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.